RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CRTAPO75718 401 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 CSN2P05814 226 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 IGHV1-8P0DP01 117 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 VSIG8P0DPA2 414 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 MGMTP16455 207 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SERPINB10P48595 397 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 UBE2E1P51965 193 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 OR10A3P58181 314 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 BPIFB3P59826 476 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 UBA52P62987 128 aaKnown RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 GUCA2AQ02747 115 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 MEF2CQ06413 473 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 BAMBIQ13145 260 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 UNC119Q13432 240 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 GPR176Q14439 515 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SLC9A3R2Q15599 337 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 C17orf58Q2M2W7 97 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 LDLRAD2Q5SZI1 272 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 ATAD3CQ5T2N8 411 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SYT6Q5T7P8 510 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 RSBN1Q5VWQ0 802 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 GLT8D1Q68CQ7 371 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 NCR3LG1Q68D85 454 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 C22orf42Q6IC83 251 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 Q6YL49 198 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 RTN4RL2Q86UN3 420 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SLC51BQ86UW2 128 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 CLVS1Q8IUQ0 354 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 OR13A1Q8NGR1 328 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 RAB2BQ8WUD1 216 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 FCGR1BQ92637 280 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 Q96M66 194 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 C19orf24Q9BVV8 132 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 SELENOIQ9C0D9 397 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 PRDM13Q9H4Q3 707 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 IFT22Q9H7X7 185 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 TNFRSF19Q9NS68 423 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 DAPK2Q9UIK4 370 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 KIF25Q9UIL4 384 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 LINC00312Q9Y6C7 94 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 ATRQ13535 2644 aa7.9□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1W2PPH5 198 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 MEIOCA2RUB1 952 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 SMIM30A4D0T7 59 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 FAM25EA8MYX2 175 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 ARL6IP5O75915 188 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CLPXO76031 633 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CRYZL1O95825 349 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 MPIG6BO95866 241 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 MELTFP08582 738 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CGB3P0DN86 165 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CGB7P0DN87 165 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 JUNBP17275 347 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 OMGP23515 440 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 HTR2CP28335 458 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 SAA4P35542 130 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CLDN12P56749 244 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 QRFPP83859 136 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 PLA2G7Q13093 441 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 P2RY14Q15391 338 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 MPV17LQ2QL34 196 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 RBMS3Q6XE24 437 aaKnown RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 TRAPPC6BQ86SZ2 158 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 NR2C2APQ86WQ0 139 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 DYRK2Q92630 601 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 CORO2AQ92828 525 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 FOXRED1Q96CU9 486 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 NICN1Q9BSH3 213 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 SLITRK2Q9H156 845 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 OR51E2Q9H255 320 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 RNF167Q9H6Y7 350 aa7.89□□□□□ -1.15
HDAC3-208ENST00000476739 TXNL4BQ9NX01 149 aaKnown RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 RCC2Q9P258 522 aaKnown RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 UBE2J1Q9Y385 318 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-208ENST00000476739 MEIKINA0A087WXM9 373 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 A0A0A6YYD4 124 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM14DPA8MWL7 114 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 SLC17A2O00624 439 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 GLP1RP43220 463 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 CTAG1AP78358 180 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 C6orf183Q5T699 404 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 HES5Q5TA89 166 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 IDO2Q6ZQW0 420 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 LHFPL4Q7Z7J7 247 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 LINC00596Q86U02 117 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 DYNAPQ8N1N2 210 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 OR6M1Q8NGM8 313 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 MRGPRDQ8TDS7 321 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 MRPS24Q96EL2 167 aaKnown RBP7.88□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF486Q96H40 463 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-208ENST00000476739 JMJD8Q96S16 334 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 BARHL1Q9BZE3 327 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 HEXA-AS1Q9H8Q6 139 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 PCDHB16Q9NRJ7 776 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms