RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SCNM1Q9BWG6 230 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 UBE2J1Q9Y385 318 aaPredicted RBP14.05□□□□□ -0.16
TMEM53-208ENST00000476724 PIGBOS1A0A0B4J2F0 54 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 FAM74A7A6NL05 159 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 SLC34A2O95436 690 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 SCTP09683 121 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 PRKACAP17612 351 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
TMEM53-208ENST00000476724 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 ZNF695Q8IW36 515 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 ERGIC1Q969X5 290 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 NRIP2Q9BQI9 281 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 GINS3Q9BRX5 216 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 SMIM3Q9BZL3 60 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 ZNF175Q9Y473 711 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 SLC22A20A6NK97 555 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 SYNGR1O43759 233 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 IL18BPO95998 194 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 GLI4P10075 376 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 SPIN3Q5JUX0 258 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 MEX3BQ6ZN04 569 aaKnown RBP14.04□□□□□ -0.16
TMEM53-208ENST00000476724 COMMD1Q8N668 190 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 HS3ST6Q96QI5 342 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 TLNRD1Q9H1K6 362 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 IFT22Q9H7X7 185 aa14.04□□□□□ -0.16
TMEM53-208ENST00000476724 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 PVALBP20472 110 aaPredicted RBP14.03□□□□□ -0.16
TMEM53-208ENST00000476724 WNT5AP41221 380 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 RAB5CP51148 216 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 GUCA2BQ16661 112 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 Q6ZRG5 221 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 CMTM1Q8IZ96 169 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 FAM58AQ8N1B3 248 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 SUMF2Q8NBJ7 301 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 DMBX1Q8NFW5 382 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 SECTM1Q8WVN6 248 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 C12orf49Q9H741 205 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 CD5P06127 495 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 H2AFB1P0C5Y9 115 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 MUC1P15941 1255 aaPredicted RBP14.03□□□□□ -0.16
TMEM53-208ENST00000476724 CTRB1P17538 263 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 S100GP29377 79 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 HIKESHIQ53FT3 197 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 IL22RA2Q969J5 263 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
TMEM53-208ENST00000476724 RCL1Q9Y2P8 373 aaKnown RBP14.03□□□□□ -0.16
TMEM53-208ENST00000476724 CLEC18AA5D8T8 446 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 DANCRP0C864 163 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 SPP1P10451 314 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 UCP1P25874 307 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 NKX2-1P43699 371 aaPredicted RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 DVL1P1P54792 670 aaPredicted RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 MRPL49Q13405 166 aaKnown RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 HERPUD1Q15011 391 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 TBC1D28Q2M2D7 210 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 DHRS7BQ6IAN0 325 aaPredicted RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 ZNF818PQ6ZRF7 136 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 SELENOHQ8IZQ5 122 aaKnown RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 CLEC18CQ8NCF0 446 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 MRPL30Q8TCC3 161 aaKnown RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 USB1Q9BQ65 265 aaKnown RBP14.02□□□□□ -0.16
TMEM53-208ENST00000476724 OR51I2Q9H344 312 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 GLRX2Q9NS18 164 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 IL36RNQ9UBH0 155 aa14.02□□□□□ -0.16
TMEM53-208ENST00000476724 NKX2-6A6NCS4 301 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 TSC22D1Q15714 1073 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 FAM76BQ5HYJ3 339 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF880Q6PDB4 577 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 MDP1Q86V88 176 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 GAPTQ8N292 157 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 GMPPAQ96IJ6 420 aaPredicted RBP14.02□□□□□ -0.17
TMEM53-208ENST00000476724 TMEM231Q9H6L2 316 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 LUZP4Q9P127 313 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 ZDHHC8Q9ULC8 765 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 WASF3Q9UPY6 502 aa14.02□□□□□ -0.17
TMEM53-208ENST00000476724 STRAPQ9Y3F4 350 aaKnown RBP14.02□□□□□ -0.17
TMEM53-208ENST00000476724 J3QT63 122 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 K7EM74 188 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 MMP9P14780 707 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 VDAC1P21796 283 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 MED12LQ86YW9 2145 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 Q8IYB0 196 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 OR2C3Q8N628 320 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 AIFM2Q9BRQ8 373 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 RTL8AQ9BWD3 113 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 C11orf1Q9H5F2 150 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 WFDC1Q9HC57 220 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 NDRG3Q9UGV2 375 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 MGAQ8IWI9 3026 aa14.01□□□□□ -0.17
TMEM53-208ENST00000476724 IGHG3P01860 377 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 MDH2P40926 338 aaKnown RBP14□□□□□ -0.17
TMEM53-208ENST00000476724 TGFBR3Q03167 851 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 OR2T2Q6IF00 324 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 PCSK4Q6UW60 755 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 OR5D13Q8NGL4 314 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 SNIP1Q8TAD8 396 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms