RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 DNAJC12Q9UKB3 198 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 SCML1Q9UN30 329 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 SIGLEC7Q9Y286 467 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 OR51B4Q9Y5P0 310 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 MYH10P35580 1976 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 PRRC2CQ9Y520 2896 aaKnown RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 MYO16Q9Y6X6 1858 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ATMQ13315 3056 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 TENM4Q6N022 2769 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 HELZP42694 1942 aaKnown RBP2.45□□□□□ -2.02
PTCD3-211ENST00000476215 SEC16AO15027 2179 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 A0A1B0GTQ1 180 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ISPDA4D126 451 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 F5H5T6 163 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 PSPHP1O15172 72 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 OR7C2O60412 319 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 LDOC1O95751 146 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-211ENST00000476215 APOEP02649 317 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 THRAP10827 490 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 GFAPP14136 432 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ATP6V0D1P61421 351 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 BTN1A1Q13410 526 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 FAM183BPQ6ZVS7 135 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 SLC25A45Q8N413 288 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ZNF680Q8NEM1 530 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 AGR3Q8TD06 166 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 GPX8Q8TED1 209 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ISOC2Q96AB3 205 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 FAM131CQ96AQ9 280 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 CSPG4P5Q96PW8 444 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 PLEKHF2Q9H8W4 249 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 ADA2Q9NZK5 511 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 SNX10Q9Y5X0 201 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 FLNCQ14315 2725 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 KIAA1549LQ6ZVL6 1849 aa2.45□□□□□ -2.02
PTCD3-211ENST00000476215 CEP192Q8TEP8 1941 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PLXND1Q9Y4D7 1925 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 ZNF462Q96JM2 2506 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 MYO18BQ8IUG5 2567 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PCDH15Q96QU1 1955 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 IGKV3D-11A0A0A0MRZ8 115 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 CXorf51AA0A1B0GTR3 108 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 VGLL3A8MV65 326 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 K7ERQ8 282 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 SLC31A1O15431 190 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 AKR7A2O43488 359 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 ZMPSTE24O75844 475 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 UCHL3P15374 230 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 GALR1P47211 349 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PSMD8P48556 350 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PPP1CAP62136 330 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 RAB11AP62491 216 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PRKCDQ05655 676 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 RAB11BQ15907 218 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 HSP90AA4PQ58FG1 418 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 BRMS1LQ5PSV4 323 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 PIP5KL1Q5T9C9 394 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 KDM4DQ6B0I6 523 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 NDUFAF7Q7L592 441 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 SETD3Q86TU7 594 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-211ENST00000476215 SGPP2Q8IWX5 399 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 ORMDL3Q8N138 153 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 SLC25A29Q8N8R3 303 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 TMEM35BQ8NCS4 154 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 OR8D1Q8WZ84 308 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 KLK6Q92876 244 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 S100PBPQ96BU1 408 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 FAM19A4Q96LR4 140 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 ALS2CR12Q96Q35 445 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 CHMP5Q9NZZ3 219 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 HS3ST2Q9Y278 367 aa2.44□□□□□ -2.02
PTCD3-211ENST00000476215 TNRC6BQ9UPQ9 1833 aaKnown RBP2.44□□□□□ -2.02
PTCD3-211ENST00000476215 ASH1LQ9NR48 2969 aaKnown RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 PLXNB3Q9ULL4 1909 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 A0A0D9SEW6 157 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 SPTY2D1-AS1A0A0U1RR47 76 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 NCF1BA6NI72 391 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 OR6C70A6NIJ9 312 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 SLC22A20A6NK97 555 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 SIGLEC16A6NMB1 481 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 NCF1CA8MVU1 366 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 A8MWL6 223 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 KPNA3O00505 521 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 YKT6O15498 198 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 KDELR3O43731 214 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 CCDC22O60826 627 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 MAS1P04201 325 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 RHOCP08134 193 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 STAG3L3P0CL85 134 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 NELFEP18615 380 aaKnown RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 CXCR1P25024 350 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 GNA12Q03113 381 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 FAM53BQ14153 422 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 TSC22D1Q15714 1073 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 STEAP4Q687X5 459 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 WDR59Q6PJI9 974 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms