RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OR51E2Q9H255 320 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 MS4A6AQ9H2W1 248 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 ASB7Q9H672 318 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 PLEKHF2Q9H8W4 249 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 FARSAQ9Y285 508 aaKnown RBP3.28□□□□□ -1.88
SMC5-203ENST00000475540 TMEM14AQ9Y6G1 99 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 ZNF780BQ9Y6R6 833 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 TUBGCP6Q96RT7 1819 aa3.28□□□□□ -1.88
SMC5-203ENST00000475540 VWA8A3KMH1 1905 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.27□□□□□ -1.89
SMC5-203ENST00000475540 TRAV8-3A0A0A6YYJ7 113 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 MYBPHLA2RUH7 354 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 H3BP45 60 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 BPY2O14599 106 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 FFAR1O14842 300 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 APCSP02743 223 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 M6PRP20645 277 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 ELK4P28324 431 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 EVI2BP34910 448 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 GTF2BQ00403 316 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 SMAGPQ0VAQ4 97 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 YIF1BQ5BJH7 314 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 HAVCR2Q8TDQ0 301 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 CYGBQ8WWM9 190 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 ASB13Q8WXK3 278 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 PPCDCQ96CD2 204 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 MYO15BQ96JP2 1530 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 NUP214P35658 2090 aaPredicted RBP3.27□□□□□ -1.89
SMC5-203ENST00000475540 HIVEP2P31629 2446 aa3.27□□□□□ -1.89
SMC5-203ENST00000475540 EVC2Q86UK5 1308 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 GPATCH8Q9UKJ3 1502 aaKnown RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 IGHV3-72A0A0B4J1Y9 119 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 IGHV7-4-1A0A0J9YVY3 117 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 A0A1W2PQL4 384 aaPredicted RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 TMEM72A0PK05 275 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 KCNK1O00180 336 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
SMC5-203ENST00000475540 COX7A2P2O60397 106 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 PLIN3O60664 434 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 OR5F1O95221 314 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 NSA2O95478 260 aaKnown RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 IDH2P48735 452 aaKnown RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 ESRRGP62508 458 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 MEF2CQ06413 473 aaPredicted RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 CDC20Q12834 499 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 PAFAH1B3Q15102 231 aaKnown RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 SSX1Q16384 188 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 PRR9Q5T870 116 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 SYPL2Q5VXT5 272 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 GLYATQ6IB77 296 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 TNFAIP8L2Q6P589 184 aaPredicted RBP3.26□□□□□ -1.89
SMC5-203ENST00000475540 XKRXQ6PP77 449 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 TRAPPC5Q8IUR0 188 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 STK40Q8N2I9 435 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 OR4K5Q8NGD3 323 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 OR5M1Q8NGP8 315 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 OPTNQ96CV9 577 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 YPEL4Q96NS1 127 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 EBPLQ9BY08 206 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 CHST5Q9GZS9 411 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 OR51B6Q9H340 312 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 MAP1LC3AQ9H492 121 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 C12orf10Q9HB07 376 aa3.26□□□□□ -1.89
SMC5-203ENST00000475540 SNAPC4Q5SXM2 1469 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 IGHV2-26A0A0B4J1V2 119 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 C9JQL5 133 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 H0YJW9 148 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 GYG2O15488 501 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 MYL12AP19105 171 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 RPS12P25398 132 aaKnown RBP3.25□□□□□ -1.89
SMC5-203ENST00000475540 PSMA1P25786 263 aaKnown RBP3.25□□□□□ -1.89
SMC5-203ENST00000475540 HSD11B1P28845 292 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 OMPP47874 163 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 DYNLL1P63167 89 aaKnown RBP3.25□□□□□ -1.89
SMC5-203ENST00000475540 CCL7P80098 99 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 LOXL1Q08397 574 aaPredicted RBP3.25□□□□□ -1.89
SMC5-203ENST00000475540 SYCNQ0VAF6 134 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 PDK2Q15119 407 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 TMED2Q15363 201 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 TMEM176BQ3YBM2 270 aaPredicted RBP3.25□□□□□ -1.89
SMC5-203ENST00000475540 ZNF684Q5T5D7 378 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 OLIG3Q7RTU3 272 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 LINC00596Q86U02 117 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 SLC25A45Q8N413 288 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 SLC25A29Q8N8R3 303 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 TTLQ8NG68 377 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 SCGB1C1Q8TD33 95 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 SLC37A2Q8TED4 501 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 TLCD1Q96CP7 247 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 C9orf16Q9BUW7 83 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 FBXL15Q9H469 300 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 C8orf17Q9NRJ1 99 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 A0A1W2PP64 1363 aa3.25□□□□□ -1.89
SMC5-203ENST00000475540 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms