RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OR7C1O76099 320 aaPredicted RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 GLAP06280 429 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 PPIAL4GP0DN37 164 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 RCVRNP35243 200 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 ERVK11-1P61568 191 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 PIGYQ3MUY2 71 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 KLF17Q5JT82 389 aaPredicted RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 PRAMEF6Q5VXH4 476 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 DCDC5Q6ZRR9 648 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 OR11L1Q8NGX0 322 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 SSBP3Q9BWW4 388 aaPredicted RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 C1orf123Q9NWV4 160 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 SH2D1BO14796 132 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 IRF2P14316 349 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 RPS2P15880 293 aaKnown RBP12.95□□□□□ -0.34
CPSF3-203ENST00000475482 CHATP28329 748 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 CD80P33681 288 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 TMEM50BP56557 158 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 TAS2R19P59542 299 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 IKZF1Q13422 519 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 RBM39Q14498 530 aaKnown RBP12.95□□□□□ -0.34
CPSF3-203ENST00000475482 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 WDR82Q6UXN9 313 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF841Q6ZN19 808 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 FAM90A1Q86YD7 464 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.95□□□□□ -0.34
CPSF3-203ENST00000475482 NEIL1Q96FI4 390 aaPredicted RBP12.95□□□□□ -0.34
CPSF3-203ENST00000475482 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 RNF7Q9UBF6 113 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 AUP1Q9Y679 476 aa12.95□□□□□ -0.34
CPSF3-203ENST00000475482 LINC00854A0A1B0GVQ3 168 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 ANKRD20A5PA0PJZ0 165 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 MEIOCA2RUB1 952 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 LANCL1O43813 399 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 LHBP01229 141 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 PTHLHP12272 177 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 GLRA1P23415 457 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 OXA1LQ15070 435 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF146Q15072 292 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 ATAD3CQ5T2N8 411 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 LYPD2Q6UXB3 125 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 C11orf53Q8IXP5 236 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 CENPSQ8N2Z9 138 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 ENKURQ8TC29 256 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 FAM216AQ8WUB2 273 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 ST8SIA4Q92187 359 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 GCDHQ92947 438 aaPredicted RBP12.94□□□□□ -0.34
CPSF3-203ENST00000475482 SLC6A7Q99884 636 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 COPZ2Q9P299 210 aa12.94□□□□□ -0.34
CPSF3-203ENST00000475482 IGHV2-70DA0A0C4DH43 119 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 FAM240BA0A1B0GVZ2 78 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 LGALS8O00214 317 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 DEGS1O15121 323 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 PLA2G10O15496 165 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 KNG1P01042 644 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 TBPP20226 339 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
CPSF3-203ENST00000475482 GUCA2AQ02747 115 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 KLF9Q13886 244 aaPredicted RBP12.93□□□□□ -0.34
CPSF3-203ENST00000475482 ACTBL2Q562R1 376 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
CPSF3-203ENST00000475482 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 ZDHHC22Q8N966 263 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 TMEM229BQ8NBD8 167 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 OR8B3Q8NGG8 313 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 LRRC29Q8WV35 223 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 OR8B2Q96RD0 313 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 OCSTAMPQ9BR26 566 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 CHST6Q9GZX3 395 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 RIMS4Q9H426 269 aaPredicted RBP12.93□□□□□ -0.34
CPSF3-203ENST00000475482 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 NUP50Q9UKX7 468 aa12.93□□□□□ -0.34
CPSF3-203ENST00000475482 SRRM5B3KS81 715 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 F8VVB4 439 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 F8VWA3 439 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 AKAIN1P0CW23 69 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF44P15621 663 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 DTYMKP23919 212 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 FPR2P25090 351 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 COMPP49747 757 aaPredicted RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 GNB2P62879 340 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 MEF2DQ14814 521 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms