RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CCL28Q9NRJ3 127 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
VAPB-204ENST00000475243 ANXA10Q9UJ72 324 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 TBX19O60806 448 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 SDK2Q58EX2 2172 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 ZP3P21754 424 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 WNT5AP41221 380 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 RNFT1Q5M7Z0 435 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 DYNLRB2Q8TF09 96 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 TMEM140Q9NV12 185 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 RHBDL1O75783 438 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 C19orf35Q6ZS72 473 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 SLC52A3Q9NQ40 469 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 VSIG4Q9Y279 399 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 CD160O95971 181 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 GALP22466 123 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 HMGA2P52926 109 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 ZNF441Q8N8Z8 693 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 HARBI1Q96MB7 349 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 MS4A10Q96PG2 267 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 AUP1Q9Y679 476 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 PSMB2P49721 201 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 SNRPEP62304 92 aaKnown RBP9.62□□□□□ -0.87
VAPB-204ENST00000475243 FAM210BQ96KR6 192 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 HDHD3Q9BSH5 251 aaPredicted RBP9.62□□□□□ -0.87
VAPB-204ENST00000475243 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 SLC23A3Q6PIS1 610 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 OR4D10Q8NGI6 311 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 OR2J1Q9GZK6 312 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 GPR35Q9HC97 309 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 M0R2Z0 102 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 PCMT1P22061 227 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 RANP62826 216 aaKnown RBP9.62□□□□□ -0.87
VAPB-204ENST00000475243 CD300LDQ6UXZ3 194 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 MDP1Q86V88 176 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 D2HGDHQ8N465 521 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 ADAMTS17Q8TE56 1095 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 TMEM204Q9BSN7 226 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
VAPB-204ENST00000475243 CCKARP32238 428 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 PRSS54Q6PEW0 395 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 DHRS11Q6UWP2 260 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 LRP11Q86VZ4 500 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 TMEM116Q8NCL8 245 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 OR2H1Q9GZK4 316 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 GLRX2Q9NS18 164 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 CLDN34H7C241 214 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 CELA2AP08217 269 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 LSM6P62312 80 aaKnown RBP9.62□□□□□ -0.87
VAPB-204ENST00000475243 ZNF880Q6PDB4 577 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 ISOC2Q96AB3 205 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 NEURL2Q9BR09 285 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
VAPB-204ENST00000475243 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 CST2P09228 141 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 CXCL3P19876 107 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 ACAA2P42765 397 aaKnown RBP9.61□□□□□ -0.87
VAPB-204ENST00000475243 CLEC18BQ6UXF7 455 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 ASB5Q8WWX0 329 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 ZNF665Q9H7R5 613 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 TCTAP57738 103 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 INPP5JQ15735 1006 aaPredicted RBP9.61□□□□□ -0.87
VAPB-204ENST00000475243 CLLU1Q5K131 121 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 SMRP1Q8NCR6 262 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 OR4X1Q8NH49 305 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 ZNF488Q96MN9 340 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 ATP5SQ99766 215 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 C11orf94C9JXX5 98 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 SYNGR2O43760 224 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 SULT1A1P50225 295 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 HMGCLL1Q8TB92 370 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 MRPL37Q9BZE1 423 aaKnown RBP9.61□□□□□ -0.87
VAPB-204ENST00000475243 A0A1W2PPV9 198 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 C21orf140B9A014 251 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 PPYP01298 95 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 DAOP14920 347 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 C21orf58P58505 322 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 C9orf40Q8IXQ3 194 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 SPICQ8N5J4 248 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 TRAV8-7A0A075B6U6 113 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 HLA-GP17693 338 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 CCL8P80075 99 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 TPRX1Q8N7U7 411 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 OR2M3Q8NG83 312 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 FAM222BQ8WU58 562 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 DTX4Q9Y2E6 619 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 HILPDAQ9Y5L2 63 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 LOC102724200A0A096LPH7 203 aaPredicted RBP9.61□□□□□ -0.87
VAPB-204ENST00000475243 SEMA7AO75326 666 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 IL11P20809 199 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 KIR2DL1P43626 348 aaPredicted RBP9.61□□□□□ -0.87
VAPB-204ENST00000475243 CD300CQ08708 224 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 CARFQ8N187 725 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 OR1L1Q8NH94 360 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 MARVELD1Q9BSK0 173 aa9.61□□□□□ -0.87
VAPB-204ENST00000475243 TCRBV16S1A1N1A0A5B0 115 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms