RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TRAF4Q9BUZ4 470 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-207ENST00000474825 ST6GALNAC5Q9BVH7 336 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 TOLLIPQ9H0E2 274 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 FAM234AQ9H0X4 552 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 C20orf85Q9H1P6 137 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF286AQ9HBT8 521 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 NUDT15Q9NV35 164 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 ETAA1Q9NY74 926 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 OPN4Q9UHM6 478 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF230Q9UIE0 474 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-207ENST00000474825 MGAT4AQ9UM21 535 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 GPR132Q9UNW8 380 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 PPP1R3CQ9UQK1 317 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 SPTBN1Q01082 2364 aaKnown RBP5.53□□□□□ -1.52
ATG4A-207ENST00000474825 NAV2Q8IVL1 2488 aa5.53□□□□□ -1.52
ATG4A-207ENST00000474825 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ROS1P08922 2347 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 HRNRQ86YZ3 2850 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 IGKV1-6A0A0C4DH72 117 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 IGHV3-64DA0A0J9YX35 117 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 KIR2DS1A0A191URI9 304 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 hCG_1807616A0A1W2PRN6 198 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 A1L4Q6 167 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 OOEPA6NGQ2 149 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 LRRC30A6NM36 301 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 SNRPGP15A8MWD9 76 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TRDCB7Z8K6 153 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 K7N7A8 449 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 OVOL3O00110 214 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 LGALS8O00214 317 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 MGST3O14880 152 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PAX4O43316 350 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 RP2O75695 350 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TUSC2O75896 110 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 DHFRP00374 187 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PMP2P02689 132 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 HPXP02790 462 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 AMY2AP04746 511 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 CGB3P0DN86 165 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 CGB7P0DN87 165 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ZNF44P15621 663 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ECI1P42126 302 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 KIR2DS4P43632 304 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 UCP3P55916 312 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 SNRPD2P62316 118 aaKnown RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 CCL8P80075 99 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 MRPS15P82914 257 aaKnown RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 DHODHQ02127 395 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 COL10A1Q03692 680 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 KIR2DS1Q14954 304 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 SURF2Q15527 256 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 HMGN3Q15651 99 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TATDN3Q17R31 274 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PAN3Q58A45 887 aaKnown RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 FAHD2BQ6P2I3 314 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ZNF782Q6ZMW2 699 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 IDO2Q6ZQW0 420 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TMEM17Q86X19 198 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TGIF2LYQ8IUE0 185 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 C1orf87Q8N0U7 546 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ZCCHC24Q8N2G6 241 aaKnown RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 ZNF561Q8N587 486 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TMEM185AQ8NFB2 350 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 OR4A4PQ8NGN8 299 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 OR5H2Q8NGV7 314 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-207ENST00000474825 RDH5Q92781 318 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 FAHD2AQ96GK7 314 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 COQ2Q96H96 371 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 LURAP1Q96LR2 239 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PPA2Q9H2U2 334 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 LIME1Q9H400 295 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 LINC00574Q9H8X3 128 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 SAP30LQ9HAJ7 183 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 DYNLRB1Q9NP97 96 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 TMEM106BQ9NUM4 274 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 NECAP2Q9NVZ3 263 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 MCUBQ9NWR8 336 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 KAAG1Q9UBP8 84 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PCDHB10Q9UN67 800 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 FLVCR2Q9UPI3 526 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 MAB21L2Q9Y586 359 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 PTPN13Q12923 2485 aa5.52□□□□□ -1.53
ATG4A-207ENST00000474825 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 PPIAL4EA0A075B759 164 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 ELOA3CA0A087WX78 387 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-207ENST00000474825 TRBV6-7A0A0A0MS04 114 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 A0A0A6YYJ9 748 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 TRAV38-1A0A0B4J264 116 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 IGHV1-69-2A0A0G2JMI3 117 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 TMEM30CPA0ZSE6 113 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 HMX3A6NHT5 357 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 PPIAL4DF5H284 164 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 SIRPB1O00241 398 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 FABP7O15540 132 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 NDUFA2O43678 99 aa5.51□□□□□ -1.53
ATG4A-207ENST00000474825 CYB5R3P00387 301 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-207ENST00000474825 TK1P04183 234 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms