RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ZFP41Q8N8Y5 198 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 SUMF2Q8NBJ7 301 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 OR9G1Q8NH87 305 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 STMN2Q93045 179 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 CPNE2Q96FN4 548 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-209ENST00000474432 TMEM80Q96HE8 168 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 RBM14Q96PK6 669 aaKnown RBP14.81□□□□□ -0.04
COL7A1-209ENST00000474432 BARHL1Q9BZE3 327 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM192AQ9GZU8 254 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 IDI2-AS1Q9NZ38 188 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 ST3GAL6Q9Y274 331 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 SH2D7A6NKC9 451 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-209ENST00000474432 J3QR06 171 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 TOR1AO14656 332 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 OR2F2O95006 317 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 IGHV3-7P01780 117 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 GNAO1P09471 354 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 BDKRB2P30411 391 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 ZNF93P35789 620 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-209ENST00000474432 RBM11P57052 281 aaKnown RBP14.8□□□□□ -0.04
COL7A1-209ENST00000474432 CD83Q01151 205 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 OSR2Q8N2R0 312 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 DHRSXQ8N5I4 330 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 ZNF565Q8N9K5 539 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 RFESDQ8TAC1 157 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 MRGPRDQ8TDS7 321 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 FBLIM1Q8WUP2 373 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 CREB3L1Q96BA8 519 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 SLC25A33Q9BSK2 321 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 DPCDQ9BVM2 203 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-209ENST00000474432 ING4Q9UNL4 249 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 PSG11Q9UQ72 335 aa14.8□□□□□ -0.04
COL7A1-209ENST00000474432 TRBV5-7A0A0A0MS05 114 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 OOSP1A8MZH6 123 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 GEMIN2O14893 280 aaKnown RBP14.79□□□□□ -0.04
COL7A1-209ENST00000474432 MYL12AP19105 171 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 C21orf33P30042 268 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-209ENST00000474432 SSTR5P35346 364 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 CEACAM3P40198 252 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 KCNJ3P48549 501 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 EMX1Q04741 257 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-209ENST00000474432 ST3GAL4Q11206 333 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 RCN1Q15293 331 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 LYPD6Q86Y78 171 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 SETD9Q8NE22 299 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 ZNF184Q99676 751 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-209ENST00000474432 METTL9Q9H1A3 318 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 C8orf4Q9NR00 106 aa14.79□□□□□ -0.04
COL7A1-209ENST00000474432 A0A1W2PPI3 338 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 C15orf65H3BRN8 121 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 XPNPEP2O43895 674 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 PPP3R1P63098 170 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 RIPK1Q13546 671 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 RBM39Q14498 530 aaKnown RBP14.78□□□□□ -0.04
COL7A1-209ENST00000474432 Q499Y3 187 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 ABCA11PQ4W5N1 156 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 YIF1BQ5BJH7 314 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 FAM53AQ6NSI3 398 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-209ENST00000474432 C10orf99Q6UWK7 81 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 OR5AU1Q8NGC0 362 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 CYYR1Q96J86 154 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-209ENST00000474432 PSORS1C1Q9UIG5 152 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 HSPE1-MOB4S4R3N1 261 aa14.78□□□□□ -0.04
COL7A1-209ENST00000474432 CASQ2O14958 399 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-209ENST00000474432 PIN1P1O15428 100 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 OR7C1O76099 320 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-209ENST00000474432 LPLP06858 475 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 FSTP19883 344 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 SERPINA2P20848 420 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 LTC4SQ16873 150 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-209ENST00000474432 THNSL2Q86YJ6 484 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 OR10A7Q8NGE5 316 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 R3HDM4Q96D70 268 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 PLCXD1Q9NUJ7 323 aa14.77□□□□□ -0.05
COL7A1-209ENST00000474432 DNAH3Q8TD57 4116 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 A0A1W2PPK0 400 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 CAPGP40121 348 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 OXLD1Q5BKU9 147 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 ARSJQ5FYB0 599 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-209ENST00000474432 CCDC144NLQ6NUI1 221 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 SLC16A12Q6ZSM3 486 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 TOMM40LQ969M1 308 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 AKR1E2Q96JD6 320 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 OR14A2Q96R54 314 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 FKBP14Q9NWM8 211 aa14.76□□□□□ -0.05
COL7A1-209ENST00000474432 CNOT2Q9NZN8 540 aaKnown RBP14.76□□□□□ -0.05
COL7A1-209ENST00000474432 RCC2Q9P258 522 aaKnown RBP14.76□□□□□ -0.05
COL7A1-209ENST00000474432 A0A1W2PPE3 182 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 EFCAB10A6NFE3 127 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 PEX14O75381 377 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 PRB2P02812 416 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-209ENST00000474432 MT-ND4P03905 459 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 CSTBP04080 98 aaKnown RBP14.75□□□□□ -0.05
COL7A1-209ENST00000474432 SNRNP70P08621 437 aaKnown RBP14.75□□□□□ -0.05
COL7A1-209ENST00000474432 MNDAP41218 407 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 GNG10P50151 68 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 ARHGDIBP52566 201 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 MPV17LQ2QL34 196 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms