RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 OR10K1Q8NGX5 313 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 SMIM19Q96E16 107 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 C8orf4Q9NR00 106 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 CHCHD3Q9NX63 227 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 DIMT1Q9UNQ2 313 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 ST3GAL6Q9Y274 331 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 NPIPB11E5RHQ5 1161 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 OGG1O15527 345 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 ZNF780AO75290 641 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 LPLP06858 475 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 BDKRB2P30411 391 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 MADCAM1Q13477 382 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 DDI2Q5TDH0 399 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 OR2G6Q5TZ20 316 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 TTC23Q5W5X9 447 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 XAF1Q6GPH4 301 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 OSR2Q8N2R0 312 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 OR4X2Q8NGF9 303 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 DPCDQ9BVM2 203 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 CKLFQ9UBR5 152 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 ING4Q9UNL4 249 aa16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 TSSC4Q9Y5U2 329 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-206ENST00000474421 TCRBV4S1A1TA0A5B7 111 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 OR7C1O76099 320 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 CDRT1O95170 752 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 PF4V1P10720 104 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 RAB7AP51149 207 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 RBM11P57052 281 aaKnown RBP16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 OXLD1Q5BKU9 147 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 SUMF2Q8NBJ7 301 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 SETD9Q8NE22 299 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 OR52N1Q8NH53 320 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 MRGPRDQ8TDS7 321 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 PSG11Q9UQ72 335 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 MOB4Q9Y3A3 225 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 HSPE1-MOB4S4R3N1 261 aa16.23■□□□□ 0.19
PDLIM4-206ENST00000474421 A0A1W2PRX2 142 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A18PA6NE21 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A16PA6NEW6 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A20PA6NIJ5 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A9PA6NNJ1 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A12PA8MX19 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A5PA8MXJ8 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 AMY1AP04745 511 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 AMY2AP04746 511 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A15PP0C7V4 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A13PP0C7W8 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A14PP0C7W9 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FAM90A24PP0C7X0 464 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 GZMHP20718 246 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 RIPK1Q13546 671 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 MPV17LQ2QL34 196 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 FBLN7Q53RD9 439 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 OR8H3Q8N146 312 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 OR10X1Q8NGY0 326 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 PLPPR1Q8TBJ4 325 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 TMEM80Q96HE8 168 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 NECAP2Q9NVZ3 263 aa16.22■□□□□ 0.19
PDLIM4-206ENST00000474421 TMEM30CPA0ZSE6 113 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 CD33P20138 364 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 GPR176Q14439 515 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 LTC4SQ16873 150 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 YIF1BQ5BJH7 314 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 C9orf152Q5JTZ5 239 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 UTF1Q5T230 341 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 PACRGLQ8N7B6 248 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 WFDC9Q8NEX5 89 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 OR56B4Q8NH76 319 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 RFESDQ8TAC1 157 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 CYGBQ8WWM9 190 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 SGCDQ92629 289 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 GHSRQ92847 366 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 LEAP2Q969E1 77 aa16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 SIRT4Q9Y6E7 314 aaPredicted RBP16.21■□□□□ 0.19
PDLIM4-206ENST00000474421 TRBV5-5A0A0J9YX44 114 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 GPX5O75715 221 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 SNRNP70P08621 437 aaKnown RBP16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 GTF2F2P13984 249 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 SERPINA2P20848 420 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 SSTR5P35346 364 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 Q499Y3 187 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 DMKNQ6E0U4 476 aaPredicted RBP16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 DRAM1Q8N682 238 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 MYDGFQ969H8 173 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 ZNF184Q99676 751 aaPredicted RBP16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 SPACA1Q9HBV2 294 aa16.2■□□□□ 0.18
PDLIM4-206ENST00000474421 A0A1W2PPI3 338 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 GEMIN2O14893 280 aaKnown RBP16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 CLIC3O95833 236 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 IGHV3-7P01780 117 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 PF4P02776 101 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 IGFBP3P17936 291 aaPredicted RBP16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 GNG10P50151 68 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 HES1Q14469 280 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 TCTEX1D4Q5JR98 221 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 ATAD3CQ5T2N8 411 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 STX19Q8N4C7 294 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 DHRSXQ8N5I4 330 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 OR52M1Q8NGK5 317 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 PHF21AQ96BD5 680 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms