RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 SCGNO76038 276 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 PRTN3P24158 256 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 SRP14P37108 136 aaKnown RBP15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 NKAPLQ5M9Q1 402 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 BRICD5Q6PL45 260 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 TRAPPC6BQ86SZ2 158 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 C11orf42Q8N5U0 333 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 ZNF565Q8N9K5 539 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 PLEKHJ1Q9NW61 149 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 ETAA1Q9NY74 926 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 SPATA2Q9UM82 520 aa15.58■□□□□ 0.08
CTDSP1-207ENST00000473420 TRAV40A0A0B4J280 105 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 ZNF729A6NN14 1252 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 PAHP00439 452 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 SRD5A1P18405 259 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 TMEM50BP56557 158 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 BPIFB3P59826 476 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 SCGB2A2Q13296 93 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 DYNC1I2Q13409 638 aaKnown RBP15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 KLF17Q5JT82 389 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 NCR3LG1Q68D85 454 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 Q6ZTK2 550 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 C6orf201Q7Z4U5 140 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 OR10R2Q8NGX6 335 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 NDNFQ8TB73 568 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 SULT4A1Q9BR01 284 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 ING3Q9NXR8 418 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 NUP50Q9UKX7 468 aa15.57■□□□□ 0.08
CTDSP1-207ENST00000473420 KIAA2026Q5HYC2 2103 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 UBE2QL1A1L167 161 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 RAB27BO00194 218 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 MT-ND4P03905 459 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 FAM157CP0CG43 387 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 RORCP51449 518 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 GPR157Q5UAW9 335 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 OR13A1Q8NGR1 328 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 TNFRSF14Q92956 283 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 ISOC1Q96CN7 298 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 ATG5Q9H1Y0 275 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 SIRT7Q9NRC8 400 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 RHBDL2Q9NX52 303 aa15.56■□□□□ 0.08
CTDSP1-207ENST00000473420 NAV3Q8IVL0 2385 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 CENPVL3A0A0U1RRI6 287 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 CLPXO76031 633 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 CGB3P0DN86 165 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 CGB7P0DN87 165 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 IGHV1-8P0DP01 117 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 HOXB4P17483 251 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 GZMHP20718 246 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 GLP1RP43220 463 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 GUCA2AQ02747 115 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 ARL6IP1Q15041 203 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 TRAT1Q6PIZ9 186 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 OR5H6Q8NGV6 325 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 ACOT12Q8WYK0 555 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 LHX4Q969G2 390 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 RAB3CQ96E17 227 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 ARHGAP5-AS1Q96IT6 56 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 FAAP24Q9BTP7 215 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 PECRQ9BY49 303 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 HEXA-AS1Q9H8Q6 139 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 LINC00574Q9H8X3 128 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 CEPT1Q9Y6K0 416 aa15.55■□□□□ 0.08
CTDSP1-207ENST00000473420 ANK3Q12955 4377 aaKnown RBP15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 KBTBD11-OT1A0A1B0GTJ5 212 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 MEX3AA1L020 520 aaKnown RBP15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 POM121CA8CG34 1229 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 H3BMQ9 156 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 IGHV4-38-2P0DP08 117 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 SPCS2Q15005 226 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 MOGAT2Q3SYC2 334 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 PLAC9Q5JTB6 97 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 HEPN1Q6WQI6 88 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 C9orf139Q6ZV77 190 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 DYRK2Q92630 601 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 SLC25A38Q96DW6 304 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 RIMS4Q9H426 269 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 CALYQ9NYX4 217 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 SESN1Q9Y6P5 492 aa15.54■□□□□ 0.08
CTDSP1-207ENST00000473420 A0A0A6YYH2 397 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 A6NJ64 397 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 RNASEK-C17orf49H0YIS7 233 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 ORC5O43913 435 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 NAPSAO96009 420 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 ZNF182P17025 639 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 EPHA1P21709 976 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 UBE2E1P51965 193 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 C17orf58Q2M2W7 97 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 UBE2NLQ5JXB2 153 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 C6orf183Q5T699 404 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 OR52W1Q6IF63 320 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 ZNF554Q86TJ5 538 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 OR10A7Q8NGE5 316 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 MRPL30Q8TCC3 161 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 MRGPRDQ8TDS7 321 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 AP3S1Q92572 193 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 CMTM3Q96MX0 182 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 RBM38Q9H0Z9 239 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 ABCG5Q9H222 651 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms