RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 GLT8D1Q68CQ7 371 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 CRIP3Q6Q6R5 217 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 BAIAP2L2Q6UXY1 529 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 MS4A15Q8N5U1 240 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 OR13A1Q8NGR1 328 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 RFESDQ8TAC1 157 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 CCDC107Q8WV48 283 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 NRG4Q8WWG1 115 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 CORO2AQ92828 525 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TOMM40LQ969M1 308 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 RPEQ96AT9 228 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 AKR1E2Q96JD6 320 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 CDCA4Q9BXL8 241 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 SELENOIQ9C0D9 397 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 BANF2Q9H503 90 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 RANBP3Q9H6Z4 567 aaPredicted RBP9.32□□□□□ -0.92
CPNE1-222ENST00000473373 ZNF696Q9H7X3 374 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 SPACA1Q9HBV2 294 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 IDI2-AS1Q9NZ38 188 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 IL36GQ9NZH8 169 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TRAPPC2LQ9UL33 140 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 BLOC1S6Q9UL45 172 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 A0A1W2PP11 408 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 MEGF11A6BM72 1044 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 AIPO00170 330 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 MYF6P23409 242 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 RPS11P62280 158 aaKnown RBP eCLIP9.31□□□□□ -0.92
CPNE1-222ENST00000473373 HSD17B12Q53GQ0 312 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 LIPKQ5VXJ0 399 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 LAIR2Q6ISS4 152 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 CCDC144NLQ6NUI1 221 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 C11orf88Q6PI97 169 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 DYNAPQ8N1N2 210 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 C11orf44Q8N8P7 122 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 OR9G1Q8NH87 305 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 PLPPR1Q8TBJ4 325 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 OR5M11Q96RB7 305 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 CST11Q9H112 138 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 FKBP14Q9NWM8 211 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 SIGLEC9Q9Y336 463 aa9.31□□□□□ -0.92
CPNE1-222ENST00000473373 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-222ENST00000473373 CHST1O43916 411 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 GPX5O75715 221 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 MPIG6BO95866 241 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 IL1AP01583 271 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 CD1AP06126 327 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 MGMTP16455 207 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 JUNBP17275 347 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-222ENST00000473373 SSTR5P35346 364 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 GDNFP39905 211 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 PROK1P58294 105 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 HES1Q14469 280 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 C17orf58Q2M2W7 97 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 C2orf68Q2NKX9 166 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 HLA-DRB5Q30154 266 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 C9orf152Q5JTZ5 239 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 NKAPLQ5M9Q1 402 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 RSBN1Q5VWQ0 802 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-222ENST00000473373 RAB12Q6IQ22 244 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 ASCL4Q6XD76 172 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 CEACAM19Q7Z692 300 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 CDH26Q8IXH8 852 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 KLHDC1Q8N7A1 406 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 ZNF485Q8NCK3 441 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 OR4P4Q8NGL7 312 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 LEAP2Q969E1 77 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 ARL11Q969Q4 196 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 MRPS24Q96EL2 167 aaKnown RBP9.3□□□□□ -0.92
CPNE1-222ENST00000473373 AJUBAQ96IF1 538 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 KIRREL1Q96J84 757 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 CITED1Q99966 193 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 ANKRD60Q9BZ19 345 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 MMP28Q9H239 520 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 Q9H521 79 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 PLGRKTQ9HBL7 147 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 ETAA1Q9NY74 926 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 FBLN5Q9UBX5 448 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
CPNE1-222ENST00000473373 UBE2QL1A1L167 161 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 SPINT2O43291 252 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 LPLP06858 475 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 GZMHP20718 246 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 CD24P25063 80 aa9.29□□□□□ -0.92
CPNE1-222ENST00000473373 KIR2DS4P43632 304 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms