RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SAMD12Q8N8I0 201 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 FRAT1Q92837 279 aaPredicted RBP4.84□□□□□ -1.63
RTF1-203ENST00000473214 TMEM203Q969S6 136 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 PYURFQ96I23 114 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 GPER1Q99527 375 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 EBF4Q9BQW3 602 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 RSPO3Q9BXY4 272 aaPredicted RBP4.84□□□□□ -1.63
RTF1-203ENST00000473214 MROQ9BYG7 248 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 LIME1Q9H400 295 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 CISHQ9NSE2 258 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 COA4Q9NYJ1 87 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 IDI2-AS1Q9NZ38 188 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 JPT1Q9UK76 154 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 NEU3Q9UQ49 428 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 CARHSP1Q9Y2V2 147 aaKnown RBP4.84□□□□□ -1.63
RTF1-203ENST00000473214 CHD6Q8TD26 2715 aa4.84□□□□□ -1.63
RTF1-203ENST00000473214 RIF1Q5UIP0 2472 aaKnown RBP4.84□□□□□ -1.64
RTF1-203ENST00000473214 TANC1Q9C0D5 1861 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MYO5AQ9Y4I1 1855 aaKnown RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 USP24Q9UPU5 2620 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MAP1BP46821 2468 aaKnown RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 PKD1L2Q7Z442 2459 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 A0A0G2JLM5 398 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PVALEFA0A1B0GWK0 134 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 CCDC160A6NGH7 325 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 STK16O75716 305 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 LALBAP00709 142 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 IFNGP01579 166 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 SLC35G6P0C7Q6 338 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 GABRA1P14867 456 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PAX1P15863 534 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 GNB3P16520 340 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 FCGR2CP31995 323 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PFN2P35080 140 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 TALDO1P37837 337 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 RND2P52198 227 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 ZNF133P52736 654 aaPredicted RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 MFAP2P55001 183 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 RAB5BP61020 215 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PMVKQ15126 192 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 QPRTQ15274 297 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 NRF1Q16656 503 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 TCTEX1D4Q5JR98 221 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 FAM219BQ5XKK7 198 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 DCUN1D2Q6PH85 259 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 CNIH2Q6PI25 160 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 CXCL17Q6UXB2 119 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MUC15Q8N387 334 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 SUMF1Q8NBK3 374 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 OR9I1Q8NGQ6 314 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 LNX1Q8TBB1 728 aaPredicted RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 AGAP11Q8TF27 550 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 BLNKQ8WV28 456 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 TMED6Q8WW62 240 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 WBP1Q96G27 269 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PITX2Q99697 317 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MND1Q9BWT6 205 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 SUCNR1Q9BXA5 334 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 MAP1LC3BQ9GZQ8 125 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 HMG20AQ9NP66 347 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 EXOSC3Q9NQT5 275 aaKnown RBP4.83□□□□□ -1.64
RTF1-203ENST00000473214 COPZ2Q9P299 210 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 PYCARDQ9ULZ3 195 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 ST3GAL6Q9Y274 331 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 VDAC3Q9Y277 283 aa4.83□□□□□ -1.64
RTF1-203ENST00000473214 RBMY1BA6NDE4 496 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 RBMY1EA6NEQ0 496 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 ZNF705EA8MWA4 302 aaPredicted RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 TRAPPC2LH3BP13 241 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 SERPINB7O75635 380 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 AIFM1O95831 613 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 MOSP00540 346 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 RBMY1DP0C7P1 496 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 RBMY1A1P0DJD3 496 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 HSD17B1P14061 328 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 MAP2K4P45985 399 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 PSMD8P48556 350 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 CRYBA2P53672 197 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 PRDX1Q06830 199 aaKnown RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 ZNF616Q08AN1 781 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 GAGE5Q13069 117 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 GAGE6Q13070 117 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 TCEAL5Q5H9L2 206 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 TMEM78Q5T7P6 136 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 TEX36Q5VZQ5 186 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 ZNF324BQ6AW86 544 aaPredicted RBP4.82□□□□□ -1.64
RTF1-203ENST00000473214 TBPL2Q6SJ96 375 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 SPNS3Q6ZMD2 512 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 Q6ZPA2 131 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 FAM183BPQ6ZVS7 135 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 NAA40Q86UY6 237 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 DOLPP1Q86YN1 238 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 VRK3Q8IV63 474 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 C4orf32Q8N8J7 132 aa4.82□□□□□ -1.64
RTF1-203ENST00000473214 OR4P4Q8NGL7 312 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms