RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 GNG10P50151 68 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 GABPB1Q06547 395 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-210ENST00000472880 MADCAM1Q13477 382 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 PIGYQ3MUY2 71 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 THNSL2Q86YJ6 484 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 PACRGLQ8N7B6 248 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 OR51A2Q8NGJ7 313 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 OR52I1Q8NGK6 324 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 OR10K1Q8NGX5 313 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 MRGPRDQ8TDS7 321 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 APH1BQ8WW43 257 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 ZNF649Q9BS31 505 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 JAM3Q9BX67 310 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 TAS2R4Q9NYW5 299 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 RPL36Q9Y3U8 105 aaKnown RBP15.7■□□□□ 0.1
COL9A3-210ENST00000472880 A0A1W2PPI3 338 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 HTR3BO95264 441 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 TMEM11P17152 192 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 RAB7AP51149 207 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 PAX5Q02548 391 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 RSBN1Q5VWQ0 802 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-210ENST00000472880 ZNF529Q6P280 563 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 DRAM1Q8N682 238 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 PLPPR1Q8TBJ4 325 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 LINC00574Q9H8X3 128 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 PSG11Q9UQ72 335 aa15.69■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A18PA6NE21 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A16PA6NEW6 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A20PA6NIJ5 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A9PA6NNJ1 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A12PA8MX19 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A5PA8MXJ8 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 NPIPB11E5RHQ5 1161 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A15PP0C7V4 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A13PP0C7W8 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A14PP0C7W9 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 FAM90A24PP0C7X0 464 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 SSTR5P35346 364 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 GTF2A1P52655 376 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-210ENST00000472880 KLHL22Q53GT1 634 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 OR8H3Q8N146 312 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 OR10A7Q8NGE5 316 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 OR51D1Q8NGF3 324 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 OR10X1Q8NGY0 326 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 RFESDQ8TAC1 157 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 GPR148Q8TDV2 347 aa15.68■□□□□ 0.1
COL9A3-210ENST00000472880 RGP1Q92546 391 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-210ENST00000472880 MRPS18AQ9NVS2 196 aaKnown RBP15.68■□□□□ 0.1
COL9A3-210ENST00000472880 CASQ2O14958 399 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-210ENST00000472880 WBP4O75554 376 aaKnown RBP15.67■□□□□ 0.1
COL9A3-210ENST00000472880 PPP3R1P63098 170 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 OGFRL1Q5TC84 451 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-210ENST00000472880 SLC16A12Q6ZSM3 486 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 C5orf56Q8N8D9 126 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 Q8NFD4 153 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 CYGBQ8WWM9 190 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 DPCDQ9BVM2 203 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-210ENST00000472880 ST3GAL6Q9Y274 331 aa15.67■□□□□ 0.1
COL9A3-210ENST00000472880 FGF16O43320 207 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 OR7C1O76099 320 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-210ENST00000472880 CSTBP04080 98 aaKnown RBP15.66■□□□□ 0.1
COL9A3-210ENST00000472880 LIMS3P0CW19 117 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 LIMS4P0CW20 117 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 DIAPH2-AS1Q14236 149 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 HNF4GQ14541 408 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 SMN1Q16637 294 aaKnown RBP15.66■□□□□ 0.1
COL9A3-210ENST00000472880 CCDC58Q4VC31 144 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 DDI2Q5TDH0 399 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 TTC23Q5W5X9 447 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 RPL22L1Q6P5R6 122 aaKnown RBP15.66■□□□□ 0.1
COL9A3-210ENST00000472880 ZNF329Q86UD4 541 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 SUMF2Q8NBJ7 301 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 CHPT1Q8WUD6 406 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 DPF1Q92782 380 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 TMEM106AQ96A25 262 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 S100A13Q99584 98 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 GPR61Q9BZJ8 451 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 METTL9Q9H1A3 318 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 DNAH3Q8TD57 4116 aa15.66■□□□□ 0.1
COL9A3-210ENST00000472880 TRAV39A0A0B4J263 110 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 SERPINE3A8MV23 424 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 K7EIL1 84 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 HSD17B6O14756 317 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 CDRT1O95170 752 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 IGKV1D-33P01593 117 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 IGKV1-33P01594 117 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 RBM11P57052 281 aaKnown RBP15.65■□□□□ 0.1
COL9A3-210ENST00000472880 RPL23AP62750 156 aaKnown RBP15.65■□□□□ 0.1
COL9A3-210ENST00000472880 ADARB1P78563 741 aaKnown RBP15.65■□□□□ 0.1
COL9A3-210ENST00000472880 NHLRC3Q5JS37 347 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 ASCL4Q6XD76 172 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 DHRSXQ8N5I4 330 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 LINC00482Q8N8I6 264 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 NOL4LQ96MY1 436 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-210ENST00000472880 TMEM138Q9NPI0 162 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 IL36GQ9NZH8 169 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 ING4Q9UNL4 249 aa15.65■□□□□ 0.1
COL9A3-210ENST00000472880 A0A1W2PPE3 182 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 TMEM30CPA0ZSE6 113 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 NUDT19A8MXV4 375 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms