RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
HIF3A-206ENST00000472815 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
HIF3A-206ENST00000472815 SNX22Q96L94 193 aa12.28□□□□□ -0.44
HIF3A-206ENST00000472815 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-206ENST00000472815 ZNF222Q9UK12 451 aa12.28□□□□□ -0.44
HIF3A-206ENST00000472815 PSPNO60542 156 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 AKR1C4P17516 323 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 EGR1P18146 543 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 FCGR2CP31995 323 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 CEBPDP49716 269 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-206ENST00000472815 EIF2B2P49770 351 aaKnown RBP12.27□□□□□ -0.45
HIF3A-206ENST00000472815 IL13RA1P78552 427 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 FCN2Q15485 313 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 C6orf183Q5T699 404 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 LYG2Q86SG7 212 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF561Q8N587 486 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 PHB2Q99623 299 aa12.27□□□□□ -0.45
HIF3A-206ENST00000472815 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.45
HIF3A-206ENST00000472815 TRAV38-1A0A0B4J264 116 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 FAM172BPA6NC97 362 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 OR5H14A6NHG9 310 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-206ENST00000472815 SIAH2O43255 324 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 PLAUP00749 431 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF728P0DKX0 622 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 PPOXP50336 477 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 UCP3P55916 312 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 DHRS2Q13268 280 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 C11orf91Q3C1V1 193 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 ZFP69Q49AA0 526 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-206ENST00000472815 SLC38A6Q8IZM9 456 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 C12orf45Q8N5I9 185 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-206ENST00000472815 OR10J5Q8NHC4 309 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 ASB13Q8WXK3 278 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 RANGRFQ9HD47 186 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-206ENST00000472815 SLC23A1Q9UHI7 598 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
HIF3A-206ENST00000472815 UBR5O95071 2799 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-206ENST00000472815 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 OOEPA6NGQ2 149 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 NKX6-3A6NJ46 265 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MGST3O14880 152 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 BET1O15155 118 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 GOSR1O95249 250 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CTSDP07339 412 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 VAMP1P23763 118 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 OR3A1P47881 315 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CD300CQ08708 224 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 SWI5Q1ZZU3 235 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 IGSF11Q5DX21 431 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 KRBOX4Q5JUW0 171 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 TEX36Q5VZQ5 186 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 LIN54Q6MZP7 749 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 C17orf107Q6ZR85 190 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MUC20Q8N307 709 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CD177Q8N6Q3 437 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MOB3AQ96BX8 217 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF486Q96H40 463 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 RAB9BQ9NP90 201 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 SPTBN1Q01082 2364 aaKnown RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 NPIPB11E5RHQ5 1161 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 J3QKU1 62 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 PPYP01298 95 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 SCTP09683 121 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 RCC1P18754 421 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CD34P28906 385 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CD80P33681 288 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 KCNJ8Q15842 424 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MST1LQ2TV78 715 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 C20orf204Q6ZNR8 217 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 Q6ZPA2 131 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 CCDC71LQ8N9Z2 235 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 ANGPTL6Q8NI99 470 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 TOMM40LQ969M1 308 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 KIRREL1Q96J84 757 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 FAM234AQ9H0X4 552 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF665Q9H7R5 613 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 MGAT4CQ9UBM8 478 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 OPN4Q9UHM6 478 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 ADGRG4Q8IZF6 3080 aa12.25□□□□□ -0.45
HIF3A-206ENST00000472815 IGHV3OR15-7A0A075B7D8 119 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms