RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 A0A1W2PRD5 423 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 A0A1W2PRF3 423 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 A0A1W2PRM7 423 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 MEX3AA1L020 520 aaKnown RBP11.59□□□□□ -0.55
BRCA1-211ENST00000472490 BTBD17A6NE02 478 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 IFITM5A6NNB3 132 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM14DPA8MWL7 114 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 PDCD6O75340 191 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 COX7A1P24310 79 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 CDK2P24941 298 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 CFPP27918 469 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 GLP1RP43220 463 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 DLX1P56177 255 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
BRCA1-211ENST00000472490 QRFPP83859 136 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-211ENST00000472490 P2RY14Q15391 338 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 HCP5Q6MZN7 132 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 PNKDQ8N490 385 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 ZDHHC22Q8N966 263 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 FAM3DQ96BQ1 224 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 GFI1Q99684 422 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 CHCHD6Q9BRQ6 235 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 TM2D1Q9BX74 207 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM133Q9H2Q1 129 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 ETAA1Q9NY74 926 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 FBLN5Q9UBX5 448 aa11.59□□□□□ -0.55
BRCA1-211ENST00000472490 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
BRCA1-211ENST00000472490 ANK3Q12955 4377 aaKnown RBP11.58□□□□□ -0.56
BRCA1-211ENST00000472490 LOC100506127A0A0U1RQW1 187 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 AIPO00170 330 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-211ENST00000472490 ARG1P05089 322 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 DYNC1I2Q13409 638 aaKnown RBP11.58□□□□□ -0.56
BRCA1-211ENST00000472490 UNC119Q13432 240 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 C2orf76Q3KRA6 126 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 HES5Q5TA89 166 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 OR10K2Q6IF99 312 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 ZNF497Q6ZNH5 498 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 LDLRAD3Q86YD5 345 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 OR10A7Q8NGE5 316 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 OR51D1Q8NGF3 324 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 PLPPR1Q8TBJ4 325 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 ZNF596Q8TC21 504 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 CREB3L1Q96BA8 519 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 CLEC7AQ9BXN2 247 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 OR51E2Q9H255 320 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 ESM1Q9NQ30 184 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 ZNF581Q9P0T4 197 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-211ENST00000472490 NAV3Q8IVL0 2385 aa11.58□□□□□ -0.56
BRCA1-211ENST00000472490 IGHV2-26A0A0B4J1V2 119 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MDFIC2A0A1B0GVS7 189 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 TRIM64CA6NLI5 447 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 NOTOA8MTQ0 251 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 IL1AP01583 271 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MT-ND4P03905 459 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 RNASE1P07998 156 aaKnown RBP11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MELTFP08582 738 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-211ENST00000472490 GADD45AP24522 165 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 BLVRBP30043 206 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-211ENST00000472490 OR10A3P58181 314 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 SRSF2Q01130 221 aaKnown RBP11.57□□□□□ -0.56
BRCA1-211ENST00000472490 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 NKAPLQ5M9Q1 402 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 C6orf183Q5T699 404 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MINOS1Q5TGZ0 78 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 ZNF626Q68DY1 528 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 ABHD12Q8N2K0 398 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 BEND2Q8NDZ0 799 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 LIN7BQ9HAP6 207 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 PLEKHJ1Q9NW61 149 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 RAB22AQ9UL26 194 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 MINOS1-NBL1R4GNA1 71 aa11.57□□□□□ -0.56
BRCA1-211ENST00000472490 A0A087X0M5 115 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 A0A1B0GX30 115 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 SHISA3A0PJX4 238 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 TOR1AO14656 332 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 ORC5O43913 435 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 TMEM127O75204 238 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 OMGP23515 440 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 CHATP28329 748 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 CD34P28906 385 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms