RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 H3BUI4 141 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 DVL1O14640 695 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 GPR37O15354 613 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FCN3O75636 299 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 TSPAN9O75954 239 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 TPPPO94811 219 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 LHBP01229 141 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 EIF4EP06730 217 aaKnown RBP7.43□□□□□ -1.22
SF3A1-206ENST00000471037 CHRM2P08172 466 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A15PP0C7V4 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A13PP0C7W8 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A14PP0C7W9 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A24PP0C7X0 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ELK1P19419 428 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 GLRA1P23415 457 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 TNFSF8P32971 234 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ETV6P41212 452 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 NPBWR2P48146 333 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 EFNB2P52799 333 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 RBM11P57052 281 aaKnown RBP7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ARF6P62330 175 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 LSAMPQ13449 338 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 IL13RA2Q14627 380 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 SMIM21Q3B7S5 101 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 SPANXN2Q5MJ10 180 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 TEX36Q5VZQ5 186 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 CNIH2Q6PI25 160 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 METAP1DQ6UB28 335 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-206ENST00000471037 BTN2A1Q7KYR7 527 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A1Q86YD7 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 CMTM4Q8IZR5 234 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM58AQ8N1B3 248 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 GCSAMQ8N6F7 178 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 OR56B1Q8NGI3 324 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 OR51T1Q8NGJ9 327 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 LRRC29Q8WV35 223 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 DIRAS2Q96HU8 199 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 Q96M66 194 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 TSC22D3Q99576 134 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 SELENOIQ9C0D9 397 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 LPAR5Q9H1C0 372 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ATG5Q9H1Y0 275 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 KCNK15Q9H427 330 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 BANF2Q9H503 90 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 HMG20AQ9NP66 347 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 DIABLOQ9NR28 239 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 RBFOX1Q9NWB1 397 aaKnown RBP7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ZNRD1Q9P1U0 126 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 EXTL2Q9UBQ6 330 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 RPUSD1Q9UJJ7 312 aaKnown RBP7.43□□□□□ -1.22
SF3A1-206ENST00000471037 VPREB3Q9UKI3 123 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 ST3GAL6Q9Y274 331 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 F8VVB4 439 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 F8VWA3 439 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 XRCC3O43542 346 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 FBP1P09467 338 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 PRKACAP17612 351 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 PTBP1P26599 531 aaKnown RBP eCLIP7.42□□□□□ -1.22
SF3A1-206ENST00000471037 ZNF45Q02386 682 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 PLA2G7Q13093 441 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 ARL6IP1Q15041 203 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 SPIN3Q5JUX0 258 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 TMEM69Q5SWH9 247 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 DHRS7BQ6IAN0 325 aaPredicted RBP7.42□□□□□ -1.22
SF3A1-206ENST00000471037 ACP7Q6ZNF0 438 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 VMO1Q7Z5L0 202 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 CCDC190Q86UF4 302 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 C1QL4Q86Z23 238 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 FAM89BQ8N5H3 189 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 BOLLQ8N9W6 283 aaKnown RBP7.42□□□□□ -1.22
SF3A1-206ENST00000471037 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 C15orf40Q8WUR7 153 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 ZNF488Q96MN9 340 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 SEBOXQ9HB31 216 aaPredicted RBP7.42□□□□□ -1.22
SF3A1-206ENST00000471037 AKIP1Q9NQ31 210 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 GLS2Q9UI32 602 aa7.42□□□□□ -1.22
SF3A1-206ENST00000471037 BTBD17A6NE02 478 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 FABP12A6NFH5 140 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.41□□□□□ -1.22
SF3A1-206ENST00000471037 RAB27BO00194 218 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 GYPAP02724 150 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 MUC1P15941 1255 aaPredicted RBP7.41□□□□□ -1.22
SF3A1-206ENST00000471037 CDK2P24941 298 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 MNDAP41218 407 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 VEGFCP49767 419 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 ZNF146Q15072 292 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 BEAN1Q3B7T3 259 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 PIGYQ3MUY2 71 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 KPRPQ5T749 579 aaPredicted RBP7.41□□□□□ -1.22
SF3A1-206ENST00000471037 PYHIN1Q6K0P9 492 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 PDZD9Q8IXQ8 264 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 BATF2Q8N1L9 274 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 OR4M1Q8NGD0 313 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 OR10R2Q8NGX6 335 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 FAM110DQ8TAY7 271 aaPredicted RBP7.41□□□□□ -1.22
SF3A1-206ENST00000471037 ST8SIA4Q92187 359 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 NEDD4LQ96PU5 975 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 350.2 ms