RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 A0A1W2PP11 408 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 FAM172BPA6NC97 362 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 NPIPB11E5RHQ5 1161 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 F2RL2O00254 374 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
COMMD3-208ENST00000470045 IL1AP01583 271 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 CSTBP04080 98 aaKnown RBP11.3□□□□□ -0.6
COMMD3-208ENST00000470045 SERPINA2P20848 420 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 GLP1RP43220 463 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 GABPB1Q06547 395 aaPredicted RBP11.3□□□□□ -0.6
COMMD3-208ENST00000470045 UTF1Q5T230 341 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 SUMF2Q8NBJ7 301 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 CFHR4Q92496 578 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 DPCDQ9BVM2 203 aaPredicted RBP11.3□□□□□ -0.6
COMMD3-208ENST00000470045 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
COMMD3-208ENST00000470045 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
COMMD3-208ENST00000470045 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 BUB1B-PAK6H3BSN5 160 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
COMMD3-208ENST00000470045 GTF2F2P13984 249 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MAPK3P27361 379 aaPredicted RBP11.29□□□□□ -0.6
COMMD3-208ENST00000470045 SLC35A2P78381 396 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 GPR176Q14439 515 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 IRF3Q14653 427 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 SLC22A6Q4U2R8 563 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 NKAIN3Q8N8D7 197 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 OR10A7Q8NGE5 316 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 OR9G1Q8NH87 305 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MUL1Q969V5 352 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 CREB3L1Q96BA8 519 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
COMMD3-208ENST00000470045 S100A13Q99584 98 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MMP27Q9H306 513 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 SERTAD4Q9NUC0 356 aa11.29□□□□□ -0.6
COMMD3-208ENST00000470045 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
COMMD3-208ENST00000470045 MRPS28Q9Y2Q9 187 aaKnown RBP11.29□□□□□ -0.6
COMMD3-208ENST00000470045 A0A1W2PPK0 400 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 LEUTXA8MZ59 168 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 CEACAM3P40198 252 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 TPTE2P1Q5T6R2 138 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 C16orf82Q7Z2V1 217 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 JAGN1Q8N5M9 183 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 KLHDC1Q8N7A1 406 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 MRGPRDQ8TDS7 321 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
COMMD3-208ENST00000470045 SGCDQ92629 289 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 OR5M11Q96RB7 305 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 ANKRD60Q9BZ19 345 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 MMP28Q9H239 520 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
COMMD3-208ENST00000470045 TMEM30CPA0ZSE6 113 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 PTGES3LE9PB15 166 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 TOR1AO14656 332 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SC5DO75845 299 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 TSPAN15O95858 294 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 MAS1P04201 325 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 MYF6P23409 242 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 NFYBP25208 207 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SSTR5P35346 364 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 PRRX1P54821 245 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.61
COMMD3-208ENST00000470045 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
COMMD3-208ENST00000470045 INSL4Q14641 139 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SPHARQ15513 63 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 GLIPR1L1Q6UWM5 242 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 Q6ZTK2 550 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 MS4A15Q8N5U1 240 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 UQCC2Q9BRT2 126 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 DUSP21Q9H596 190 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 LIN7BQ9HAP6 207 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 SCN3BQ9NY72 215 aa11.27□□□□□ -0.61
COMMD3-208ENST00000470045 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 LOC100996750A0A140TA64 210 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A10PA6NDY2 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A7PA6NKC0 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A23PA8MXZ1 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 H0YHG0 523 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 C15orf65H3BRN8 121 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 J3QR06 171 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
COMMD3-208ENST00000470045 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms