RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 BPIFB2Q8N4F0 458 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 MS4A15Q8N5U1 240 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF418Q8TF45 676 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 NPRL2Q8WTW4 380 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 H1FXQ92522 213 aaKnown RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 RORBQ92753 470 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 UFD1Q92890 307 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 FGGYQ96C11 551 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF184Q99676 751 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 PKIBQ9C010 78 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 CHST5Q9GZS9 411 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 FAM192AQ9GZU8 254 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 DNTTIP1Q9H147 329 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 RHOFQ9HBH0 211 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 FGF20Q9NP95 211 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 GPR173Q9NS66 373 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 BABAM2Q9NXR7 383 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 RRP15Q9Y3B9 282 aaKnown RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 V9GYS6 101 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 TACC2O95359 2948 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 LRBAP50851 2863 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PPIAL4CA0A0B4J2A2 164 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 BTBD17A6NE02 478 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CEACAM18A8MTB9 384 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF879B4DU55 563 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 H3BSH0 61 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 J3QR06 171 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SH2D1BO14796 132 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 MAGEB4O15481 346 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SULT1B1O43704 296 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 GYPAP02724 150 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 FAM157CP0CG43 387 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PSKH1P11801 424 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CCL1P22362 96 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PSMA1P25786 263 aaKnown RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CD80P33681 288 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CFHR2P36980 270 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 BDH1Q02338 343 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 IL24Q13007 206 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 MAB21L1Q13394 359 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 GPR176Q14439 515 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 ZMYND11Q15326 602 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 RSU1Q15404 277 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 MPPED2Q15777 294 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 YIF1BQ5BJH7 314 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 FAM120AOSQ5T036 256 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 GPR157Q5UAW9 335 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 UTS2BQ765I0 119 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 GDPD3Q7L5L3 318 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SSX6Q7RTT6 188 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF561Q8N587 486 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 ASCC1Q8N9N2 400 aaKnown RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM185AQ8NFB2 350 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 OR5D13Q8NGL4 314 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 RPL3LQ92901 407 aaKnown RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 EMG1Q92979 244 aaKnown RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM106AQ96A25 262 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SMIM19Q96E16 107 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PELI1Q96FA3 418 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CEP19Q96LK0 163 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 OPALINQ96PE5 141 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 DUX5Q96PT3 197 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SMR3AQ99954 134 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM246Q9BRR3 403 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CENPOQ9BU64 300 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 SUCNR1Q9BXA5 334 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 ANKRD60Q9BZ19 345 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PPIL3Q9H2H8 161 aaKnown RBP5.14□□□□□ -1.59
PTCD3-208ENST00000469585 RAB9BQ9NP90 201 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 PLCXD1Q9NUJ7 323 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 AUP1Q9Y679 476 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 CACNG2Q9Y698 323 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 FBN2P35556 2912 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 HIVEP2P31629 2446 aa5.14□□□□□ -1.59
PTCD3-208ENST00000469585 MED13LQ71F56 2210 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 F8P00451 2351 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 DYSFO75923 2080 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 PNMA8CA0A1B0GUJ8 204 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 A0A1B0GUV1 79 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 A0A1B0GWJ7 208 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 OR2AT4A6NND4 320 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 SRRM5B3KS81 715 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 AKR7A2O43488 359 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 XPNPEP2O43895 674 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 MRPS14O60783 128 aaKnown RBP5.13□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF780AO75290 641 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-208ENST00000469585 CRLF1O75462 422 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 ARL6IP5O75915 188 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 PTBP3O95758 552 aaKnown RBP5.13□□□□□ -1.59
PTCD3-208ENST00000469585 CDK1P06493 297 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 ATF1P18846 271 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 CELP19835 753 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 ACKR3P25106 362 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 AZGP1P25311 298 aaKnown RBP5.13□□□□□ -1.59
PTCD3-208ENST00000469585 ARHGDIBP52566 201 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 BPIFB3P59826 476 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 CDK5R1Q15078 307 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 IZUMO4Q1ZYL8 232 aa5.13□□□□□ -1.59
PTCD3-208ENST00000469585 Q499Y3 187 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms