RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 RPEQ96AT9 228 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 OTULINQ96BN8 352 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 RCN3Q96D15 328 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 RITA1Q96K30 269 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CEP19Q96LK0 163 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 UBE2E2Q96LR5 201 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 PBOV1Q9GZY1 135 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 OR51V1Q9H2C8 321 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 TMBIM4Q9HC24 238 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 COPS3Q9UNS2 423 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 PSG11Q9UQ72 335 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 MYRFQ9Y2G1 1151 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 FAM32AQ9Y421 112 aaKnown RBP4.01□□□□□ -1.77
PTPN4-209ENST00000469511 HERC1Q15751 4861 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 TRGV10A0A0A0MS01 117 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 IGHV1-3A0A0C4DH29 117 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 IGKV1-12A0A0C4DH73 117 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 A0A0G2JND7 137 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 A0A0U1RQV5 110 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 A0A1B0GVY2 172 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 TMEM269A0A1B0GVZ9 245 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 OOSP1A8MZH6 123 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 LINC01619G3V211 115 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 MGST3O14880 152 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ENTPD6O75354 484 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 OR2H2O95918 312 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 IGKV1D-12P01611 117 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 LYNP07948 512 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 SLC2A2P11168 524 aaPredicted RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 ALOX5APP20292 161 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ERP29P30040 261 aaKnown RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 RRM2P31350 389 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 NUDT2P50583 147 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 RAB9AP51151 201 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ISL1P61371 349 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 SCN1BQ07699 218 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 KPNB1Q14974 876 aaKnown RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 CLVS2Q5SYC1 327 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 OR52W1Q6IF63 320 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 CCDC144NLQ6NUI1 221 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 WDR93Q6P2C0 686 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 IL34Q6ZMJ4 242 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 SLC25A26Q70HW3 274 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 SHFQ7M4L6 423 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 MOB3BQ86TA1 216 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 COMMD2Q86X83 199 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 LYPD6Q86Y78 171 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 TGIF2LXQ8IUE1 241 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 BBS1Q8NFJ9 593 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 OR13A1Q8NGR1 328 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 OR9G1Q8NH87 305 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 UBALD1Q8TB05 177 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ANP32BQ92688 251 aaKnown RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 EMG1Q92979 244 aaKnown RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 S1PR3Q99500 378 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 PKIBQ9C010 78 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 TOLLIPQ9H0E2 274 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 PLEKHA3Q9HB20 300 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 SAR1AQ9NR31 198 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 LIN7CQ9NUP9 197 aaKnown RBP4□□□□□ -1.77
PTPN4-209ENST00000469511 TAS2R3Q9NYW6 316 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ENPP5Q9UJA9 477 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 VSIG4Q9Y279 399 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 FBXO7Q9Y3I1 522 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 DNAH2Q9P225 4427 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 PKHD1P08F94 4074 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 FAT2Q9NYQ8 4349 aa4□□□□□ -1.77
PTPN4-209ENST00000469511 ODAMA1E959 279 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 FAM90A10PA6NDY2 464 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 RAB27BO00194 218 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 DLGAP1O14490 977 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ATP6V0E1O15342 81 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 HSPA12AO43301 675 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 TRIAP1O43715 76 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 DHRS3O75911 302 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 IGF1P05019 195 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 PRKACAP17612 351 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 VDAC1P21796 283 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 VHLP40337 213 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 PTGFRP43088 359 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ARHGDIBP52566 201 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ZP1P60852 638 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 NDPQ00604 133 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ODF4Q2M2E3 257 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ZIK1Q3SY52 487 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 SPATS1Q496A3 300 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 GLYATQ6IB77 296 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 CGB2Q6NT52 195 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 C8orf82Q6P1X6 216 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 Q6P435 159 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 RASSF6Q6ZTQ3 369 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 FAM58AQ8N1B3 248 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 DEFB125Q8N687 156 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 TMEM104Q8NE00 496 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 OR52L1Q8NGH7 329 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 CYYR1Q96J86 154 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms