RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZFP57Q9NU63 452 aa9.65□□□□□ -0.86
HDAC3-204ENST00000469207 ZNF736B4DX44 427 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 NPIPB11E5RHQ5 1161 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 H0YHG0 523 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 CCL24O00175 119 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 IL1AP01583 271 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 C21orf33P30042 268 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 DGCR2P98153 550 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 MADCAM1Q13477 382 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 NKAPLQ5M9Q1 402 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 ZNF691Q5VV52 312 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 RSBN1Q5VWQ0 802 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 UNQ9370/PRO34162Q6UXP9 181 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 ZNF695Q8IW36 515 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 LGALS12Q96DT0 336 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 AMBNQ9NP70 447 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
HDAC3-204ENST00000469207 EXOGQ9Y2C4 368 aaKnown RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 LSM4Q9Y4Z0 139 aaKnown RBP9.64□□□□□ -0.87
HDAC3-204ENST00000469207 IGHV3-43A0A0B4J1X8 118 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 IGHV1-3A0A0C4DH29 117 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 NCBP2LA6PVI3 153 aaKnown RBP9.63□□□□□ -0.87
HDAC3-204ENST00000469207 GABRPO00591 440 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 SULT1B1O43704 296 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 ZFPL1O95159 310 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 CDRT1O95170 752 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 HTR3BO95264 441 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 IGHV3-43DP0DP04 118 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 MTNR1BP49286 362 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 SERPINA12Q8IW75 414 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 ACBD7Q8N6N7 88 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 OR10X1Q8NGY0 326 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 HAVCR2Q8TDQ0 301 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 TNFAIP8L1Q8WVP5 186 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 CENPNQ96H22 339 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-204ENST00000469207 MCRIP2Q9BUT9 160 aaKnown RBP9.63□□□□□ -0.87
HDAC3-204ENST00000469207 LINC00574Q9H8X3 128 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 IMPAD1Q9NX62 359 aa9.63□□□□□ -0.87
HDAC3-204ENST00000469207 AMMECR1Q9Y4X0 333 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-204ENST00000469207 HSD17B6O14756 317 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 FGF16O43320 207 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 DBTP11182 482 aaKnown RBP9.62□□□□□ -0.87
HDAC3-204ENST00000469207 SOX2P48431 317 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 RAB7AP51149 207 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-204ENST00000469207 SLC35B1P78383 322 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 EBI3Q14213 229 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 ELP2Q6IA86 826 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 Q8N9W7 124 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 SUMF2Q8NBJ7 301 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 OR5D14Q8NGL3 314 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 CCDC107Q8WV48 283 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 TRUB1Q8WWH5 349 aaKnown RBP9.62□□□□□ -0.87
HDAC3-204ENST00000469207 ORAI1Q96D31 301 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 CYYR1Q96J86 154 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 GPER1Q99527 375 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 ALG8Q9BVK2 526 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 GPR61Q9BZJ8 451 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 RHOFQ9HBH0 211 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 PLSCR3Q9NRY6 295 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 SCOCQ9UIL1 159 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 U3KQK5 164 aa9.62□□□□□ -0.87
HDAC3-204ENST00000469207 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
HDAC3-204ENST00000469207 CCRL2O00421 344 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 SLC31A2O15432 143 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 ECI1P42126 302 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 GPR12P47775 334 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 F2RL1P55085 397 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 SNRPGP62308 76 aaKnown RBP9.61□□□□□ -0.87
HDAC3-204ENST00000469207 GALEQ14376 348 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 RSU1Q15404 277 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 PNLIPRP3Q17RR3 467 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 SLC25A30Q5SVS4 291 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 TEX38Q6PEX7 206 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 C5orf24Q7Z6I8 188 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 FOXRED2Q8IWF2 684 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 OR8H3Q8N146 312 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 Q8N6K4 173 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 PXT1Q8NFP0 134 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 OR5AK2Q8NH90 309 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
HDAC3-204ENST00000469207 PYDC1Q8WXC3 89 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 RGP1Q92546 391 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-204ENST00000469207 HSPB9Q9BQS6 159 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 DPCDQ9BVM2 203 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-204ENST00000469207 FAM192AQ9GZU8 254 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 NCOR1P1Q9H4R4 102 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 PCDHB16Q9NRJ7 776 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 TAS2R4Q9NYW5 299 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 ING4Q9UNL4 249 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 DHDHQ9UQ10 334 aa9.61□□□□□ -0.87
HDAC3-204ENST00000469207 A0A1W2PP11 408 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 C15orf65H3BRN8 121 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 GEMIN2O14893 280 aaKnown RBP9.6□□□□□ -0.87
HDAC3-204ENST00000469207 GAPDHP04406 335 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms