RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TRUB1Q8WWH5 349 aaKnown RBP9.64□□□□□ -0.87
COL5A1-207ENST00000469093 PELI1Q96FA3 418 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-207ENST00000469093 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 RIBC2Q9H4K1 309 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
COL5A1-207ENST00000469093 LSM4Q9Y4Z0 139 aaKnown RBP9.64□□□□□ -0.87
COL5A1-207ENST00000469093 U3KQK5 164 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 RYR3Q15413 4870 aa9.64□□□□□ -0.87
COL5A1-207ENST00000469093 SAC3D1A6NKF1 404 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 H3BNX3 289 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 J3QLW9 94 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 IL1AP01583 271 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 ZNF19P17023 458 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 GLP1RP43220 463 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 ALKBH1Q13686 389 aaKnown RBP9.63□□□□□ -0.87
COL5A1-207ENST00000469093 EBI3Q14213 229 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 LTC4SQ16873 150 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 PAN3Q58A45 887 aaKnown RBP9.63□□□□□ -0.87
COL5A1-207ENST00000469093 NKAPLQ5M9Q1 402 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 SLC25A30Q5SVS4 291 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 RSBN1Q5VWQ0 802 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-207ENST00000469093 TEX38Q6PEX7 206 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 SLC16A12Q6ZSM3 486 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 SERPINA12Q8IW75 414 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 FOXRED2Q8IWF2 684 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 OR8H3Q8N146 312 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 OR5D14Q8NGL3 314 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 CNIH3Q8TBE1 160 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 MRGPRDQ8TDS7 321 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 RNFT2Q96EX2 444 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 ORC6Q9Y5N6 252 aa9.63□□□□□ -0.87
COL5A1-207ENST00000469093 TRAV39A0A0B4J263 110 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 A0A1W2PPE3 182 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 RPLP1P05386 114 aaKnown RBP9.62□□□□□ -0.87
COL5A1-207ENST00000469093 HCKP08631 526 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 GNG10P50151 68 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 GP2P55259 537 aaKnown RBP9.62□□□□□ -0.87
COL5A1-207ENST00000469093 RAB25P57735 213 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 PAX5Q02548 391 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 KIR2DS1Q14954 304 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 PNLIPRP3Q17RR3 467 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 ZNF691Q5VV52 312 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 PXT1Q8NFP0 134 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 OR10A7Q8NGE5 316 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 PLPPR1Q8TBJ4 325 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
COL5A1-207ENST00000469093 C4orf36Q96KX1 117 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 C9orf16Q9BUW7 83 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 VCXQ9H320 206 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 OAZ3Q9UMX2 235 aa9.62□□□□□ -0.87
COL5A1-207ENST00000469093 IGHV3-72A0A0B4J1Y9 119 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 IGHV1-3A0A0C4DH29 117 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 NCBP2LA6PVI3 153 aaKnown RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 AP4M1O00189 453 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 SULT1B1O43704 296 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 ZFPL1O95159 310 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 GAPDHP04406 335 aaKnown RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 SSTR5P35346 364 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 GPR12P47775 334 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 CDX1P47902 265 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 REG1BP48304 166 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 LUMP51884 338 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 MOB3BQ86TA1 216 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 TGIF2LXQ8IUE1 241 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 Q8N6K4 173 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 Q8NFD4 153 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 OR10X1Q8NGY0 326 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 PRR25Q96S07 402 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 ISG20L2Q9H9L3 353 aaKnown RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 SCOCQ9UIL1 159 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 EXOGQ9Y2C4 368 aaKnown RBP9.61□□□□□ -0.87
COL5A1-207ENST00000469093 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
COL5A1-207ENST00000469093 CCRL2O00421 344 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 HSD17B6O14756 317 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 GZMHP20718 246 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 KCNJ3P48549 501 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 SNRPGP62308 76 aaKnown RBP9.6□□□□□ -0.87
COL5A1-207ENST00000469093 GPR50Q13585 617 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 IL13RA2Q14627 380 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 PIGYQ3MUY2 71 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 MEDAGQ5VYS4 303 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 ASCL4Q6XD76 172 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 LHFPL3Q86UP9 236 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 Q8N9W7 124 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 OR2T10Q8NGZ9 312 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 PDCD1LG2Q9BQ51 273 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 GON7Q9BXV9 100 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms