RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PRRX1P54821 245 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 SLC22A6Q4U2R8 563 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 LINC00596Q86U02 117 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 CDH26Q8IXH8 852 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF702PQ9H963 129 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 PTGES3LE9PB15 166 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 TOR1AO14656 332 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 PIN1P1O15428 100 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 NFYBP25208 207 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 AQP4P55087 323 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 GPR176Q14439 515 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 UTF1Q5T230 341 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 Q8N2B8 174 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 KIRREL1Q96J84 757 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 CALYQ9NYX4 217 aa13.74□□□□□ -0.21
SSBP1-207ENST00000468267 A0A1W2PP11 408 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 NPIPB11E5RHQ5 1161 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 H3BUI4 141 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 MAS1P04201 325 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 GTF2F2P13984 249 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 HERPUD1Q15011 391 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 HLA-DRB5Q30154 266 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 JAGN1Q8N5M9 183 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 THRSPQ92748 146 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 MUL1Q969V5 352 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 MMP27Q9H306 513 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 IDI2-AS1Q9NZ38 188 aa13.73□□□□□ -0.21
SSBP1-207ENST00000468267 MRPS28Q9Y2Q9 187 aaKnown RBP13.73□□□□□ -0.21
SSBP1-207ENST00000468267 IL1AP01583 271 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 MAPK3P27361 379 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-207ENST00000468267 BRS3P32247 399 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 CEACAM3P40198 252 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-207ENST00000468267 TPTE2P1Q5T6R2 138 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 GLIPR1L1Q6UWM5 242 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 UNQ9370/PRO34162Q6UXP9 181 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 Q6ZTK2 550 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 LYPD6Q86Y78 171 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 MS4A15Q8N5U1 240 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 OR10A7Q8NGE5 316 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 OR9G1Q8NH87 305 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 MRGPRDQ8TDS7 321 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 MRPS24Q96EL2 167 aaKnown RBP13.72□□□□□ -0.21
SSBP1-207ENST00000468267 PRSS22Q9GZN4 317 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 SERTAD4Q9NUC0 356 aa13.72□□□□□ -0.21
SSBP1-207ENST00000468267 LSM2Q9Y333 95 aaKnown RBP13.72□□□□□ -0.21
SSBP1-207ENST00000468267 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 TMEM30CPA0ZSE6 113 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 GZMHP20718 246 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 BLCAPP62952 87 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 SLC35A2P78381 396 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 HABP2Q14520 560 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-207ENST00000468267 SPHARQ15513 63 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 ATAD3CQ5T2N8 411 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 SLC16A12Q6ZSM3 486 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 RFESDQ8TAC1 157 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 CFHR4Q92496 578 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 SGCDQ92629 289 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 OR5M11Q96RB7 305 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 MMP28Q9H239 520 aa13.71□□□□□ -0.21
SSBP1-207ENST00000468267 OOSP1A8MZH6 123 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 J3QR06 171 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 TSPAN15O95858 294 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 VSIG10L2P0DP72 767 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 MYF6P23409 242 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 CD24P25063 80 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 SSTR5P35346 364 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 RBM39Q14498 530 aaKnown RBP13.7□□□□□ -0.22
SSBP1-207ENST00000468267 INSL4Q14641 139 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 IRF3Q14653 427 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 C2orf68Q2NKX9 166 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 AWAT2Q6E213 333 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 ZNF497Q6ZNH5 498 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 Q6ZS46 218 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 C16orf82Q7Z2V1 217 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 NKAIN3Q8N8D7 197 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 LEAP2Q969E1 77 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 DUSP21Q9H596 190 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 SPACA1Q9HBV2 294 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 RCC2Q9P258 522 aaKnown RBP13.7□□□□□ -0.22
SSBP1-207ENST00000468267 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 NOTCH3Q9UM47 2321 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 TGP01266 2768 aa13.7□□□□□ -0.22
SSBP1-207ENST00000468267 H0YHG0 523 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 IGHV3-7P01780 117 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 MT-ND4P03905 459 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms