RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CRYM-AS1A6NIL9 109 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 HMSDA8MTL9 139 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 CCL21O00585 134 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 LHBP01229 141 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 PPYP01298 95 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 CD55P08174 381 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 TNFSF4P23510 183 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 VAMP1P23763 118 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 ZNF81P51508 661 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 HERV-K104P61576 105 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 HLA-DRB3P79483 266 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 SORDQ00796 357 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 FGL1Q08830 312 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 DCAF12L2Q5VW00 463 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 ALKBH2Q6NS38 261 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 ZNF826PQ6ZT77 177 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 SGPP2Q8IWX5 399 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 FAM185AQ8N0U4 392 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 UXS1Q8NBZ7 420 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 LILRB4Q8NHJ6 448 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 Q8TCH9 128 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 GALNT14Q96FL9 552 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 WFIKKN1Q96NZ8 548 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 RSRP1Q9BUV0 290 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 CHIAQ9BZP6 476 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 IL19Q9UHD0 177 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 SLC23A1Q9UHI7 598 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 MYO7BQ6PIF6 2116 aa8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 PRRC2CQ9Y520 2896 aaKnown RBP8.03□□□□□ -1.12
APOBEC1-202ENST00000467171 PIEZO2Q9H5I5 2752 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 TRBV6-7A0A0A0MS04 114 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 IGKV1-6A0A0C4DH72 117 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 TMEM30CPA0ZSE6 113 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 SIRPB1O00241 398 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 HSPB6O14558 160 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 ABCD4O14678 606 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 SIX6O95475 246 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 SCTP09683 121 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 AADACP22760 399 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 GMFBP60983 142 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 RND3P61587 244 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 CYCSP99999 105 aaKnown RBP8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 BAMBIQ13145 260 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 HERPUD1Q15011 391 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 HMGN3Q15651 99 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 Q5BKY6 102 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 IGSF11Q5DX21 431 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 NCMAPQ5T1S8 102 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 SLC35E4Q6ICL7 350 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 VHLLQ6RSH7 139 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 PCSK4Q6UW60 755 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 C8orf86Q6ZUL3 223 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 PLPPR1Q8TBJ4 325 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 LRRC29Q8WV35 223 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 LRRC46Q96FV0 321 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 OR2V2Q96R30 315 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 VRK1Q99986 396 aaPredicted RBP8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 TMEM246Q9BRR3 403 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 ESRP2Q9H6T0 727 aaKnown RBP8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 PLSCR3Q9NRY6 295 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 COQ3Q9NZJ6 369 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 KCNIP3Q9Y2W7 256 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 HSPB11Q9Y547 144 aa8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
APOBEC1-202ENST00000467171 hCG_1807616A0A1W2PRN6 198 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 RFPL4AA6NLU0 287 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 RFPL4AL1F8VTS6 287 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 WNT9BO14905 357 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 SPRY3O43610 288 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 PSPNO60542 156 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 IFNA2P01563 188 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 IGHV1-46P01743 117 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 WNT2P09544 360 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 SLC25A4P12235 298 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 PI3P19957 117 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 C4BPBP20851 252 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 ADORA2A-AS1P86434 159 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 ADIPOQQ15848 244 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 LGALSLQ3ZCW2 172 aaPredicted RBP8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 TMEM65Q6PI78 240 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 H1FOOQ8IZA3 346 aaPredicted RBP8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 GCSAMQ8N6F7 178 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 LRTM2Q8N967 370 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 ASCC1Q8N9N2 400 aaKnown RBP8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 CCDC71LQ8N9Z2 235 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 PPP1R35Q8TAP8 253 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 CASTOR1Q8WTX7 329 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 FAM222BQ8WU58 562 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 RTN4IP1Q8WWV3 396 aaPredicted RBP8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 FAM122AQ96E09 287 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 SUCNR1Q9BXA5 334 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 TOLLIPQ9H0E2 274 aa8.01□□□□□ -1.13
APOBEC1-202ENST00000467171 NCOR1P1Q9H4R4 102 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms