RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GTF2A1P52655 376 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-206ENST00000466532 HES1Q14469 280 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 RSBN1Q5VWQ0 802 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-206ENST00000466532 ZNF529Q6P280 563 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 DRAM1Q8N682 238 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 RFESDQ8TAC1 157 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 HAVCR2Q8TDQ0 301 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 RGP1Q92546 391 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-206ENST00000466532 RCC1LQ96I51 464 aaKnown RBP15.21■□□□□ 0.03
COL9A3-206ENST00000466532 LINC00574Q9H8X3 128 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 PSG11Q9UQ72 335 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 ZNF281Q9Y2X9 895 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 RPL36Q9Y3U8 105 aaKnown RBP15.21■□□□□ 0.03
COL9A3-206ENST00000466532 LOC100130705A0A1B0GUX0 176 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 A0A1W2PPI3 338 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 NPIPB11E5RHQ5 1161 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 HTR3BO95264 441 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 SSTR5P35346 364 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 KCNJ3P48549 501 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 PAX5Q02548 391 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 MADCAM1Q13477 382 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 DIAPH2-AS1Q14236 149 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 KLHL22Q53GT1 634 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 Q8NFD4 153 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 SLC29A1Q99808 456 aa15.2■□□□□ 0.02
COL9A3-206ENST00000466532 MRPS18AQ9NVS2 196 aaKnown RBP15.2■□□□□ 0.02
COL9A3-206ENST00000466532 TRAV39A0A0B4J263 110 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 DUS4LO95620 317 aaKnown RBP15.19■□□□□ 0.02
COL9A3-206ENST00000466532 CD2P06729 351 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 LIMS3P0CW19 117 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 LIMS4P0CW20 117 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 TMEM11P17152 192 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 RAB7AP51149 207 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 ASCL4Q6XD76 172 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 ZNF329Q86UD4 541 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 OR10A7Q8NGE5 316 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 GPR148Q8TDV2 347 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 APH1BQ8WW43 257 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 DPCDQ9BVM2 203 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-206ENST00000466532 FAM118AQ9NWS6 357 aa15.19■□□□□ 0.02
COL9A3-206ENST00000466532 K7EIL1 84 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 CDRT1O95170 752 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 HNF4GQ14541 408 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 XAF1Q6GPH4 301 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 RPL22L1Q6P5R6 122 aaKnown RBP15.18■□□□□ 0.02
COL9A3-206ENST00000466532 C10orf67Q8IYJ2 551 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 OR8H3Q8N146 312 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 C5orf56Q8N8D9 126 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 SUMF2Q8NBJ7 301 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 OR10X1Q8NGY0 326 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 ZNF581Q9P0T4 197 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 ING4Q9UNL4 249 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 ST3GAL6Q9Y274 331 aa15.18■□□□□ 0.02
COL9A3-206ENST00000466532 A0A1W2PPE3 182 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 FGF16O43320 207 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 OR7C1O76099 320 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-206ENST00000466532 IGKV1D-33P01593 117 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 IGKV1-33P01594 117 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 SLC16A12Q6ZSM3 486 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 LINC00482Q8N8I6 264 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 CHPT1Q8WUD6 406 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 TMEM106AQ96A25 262 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 NOL4LQ96MY1 436 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-206ENST00000466532 METTL9Q9H1A3 318 aa15.17■□□□□ 0.02
COL9A3-206ENST00000466532 FGF20Q9NP95 211 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-206ENST00000466532 COL7A1Q02388 2944 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 SERPINE3A8MV23 424 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 HSD17B6O14756 317 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 CSTBP04080 98 aaKnown RBP15.16■□□□□ 0.02
COL9A3-206ENST00000466532 ZNF93P35789 620 aaPredicted RBP15.16■□□□□ 0.02
COL9A3-206ENST00000466532 ETV1P50549 477 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 RBM11P57052 281 aaKnown RBP15.16■□□□□ 0.02
COL9A3-206ENST00000466532 KRTAP10-11P60412 298 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 PPP3R1P63098 170 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 SMN1Q16637 294 aaKnown RBP15.16■□□□□ 0.02
COL9A3-206ENST00000466532 CCDC58Q4VC31 144 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 DDI2Q5TDH0 399 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 OR51D1Q8NGF3 324 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 S100A13Q99584 98 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 IFT22Q9H7X7 185 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 TMEM138Q9NPI0 162 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 IL36GQ9NZH8 169 aa15.16■□□□□ 0.02
COL9A3-206ENST00000466532 TMEM30CPA0ZSE6 113 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 GEMIN2O14893 280 aaKnown RBP15.15■□□□□ 0.02
COL9A3-206ENST00000466532 WBP4O75554 376 aaKnown RBP15.15■□□□□ 0.02
COL9A3-206ENST00000466532 SERPINA2P20848 420 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 BDKRB2P30411 391 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 RPL23AP62750 156 aaKnown RBP15.15■□□□□ 0.02
COL9A3-206ENST00000466532 NHLRC3Q5JS37 347 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 OR2G6Q5TZ20 316 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 TMPRSS11AQ6ZMR5 421 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 ETV3LQ6ZN32 361 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 MRPL41Q8IXM3 137 aaKnown RBP15.15■□□□□ 0.02
COL9A3-206ENST00000466532 PQLC1Q8N2U9 271 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 LINC00527Q9UJ94 153 aa15.15■□□□□ 0.02
COL9A3-206ENST00000466532 WI2-2373I1.2A0A1W2PRP0 233 aa15.14■□□□□ 0.01
COL9A3-206ENST00000466532 CCRL2O00421 344 aa15.14■□□□□ 0.01
COL9A3-206ENST00000466532 GZMHP20718 246 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms