RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 RTN4RL2Q86UN3 420 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 OR8G5Q8NG78 346 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 OR13G1Q8NGZ3 307 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 LRRC46Q96FV0 321 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 RNF126Q9BV68 326 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 TMEM100Q9NV29 134 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 DNAJB11Q9UBS4 358 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 ATP23Q9Y6H3 246 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 IGKV1-12A0A0C4DH73 117 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 IGKV1D-12P01611 117 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 SNU13P55769 128 aaKnown RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 EIF5AP63241 154 aaKnown RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 BAP18Q8IXM2 172 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 C2orf50Q96LR7 162 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 AQP10Q96PS8 301 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 RTBDNQ9BSG5 229 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 ESRP2Q9H6T0 727 aaKnown RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 TMEM225BP0DP42 221 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 CTRB1P17538 263 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 AGAP20933 346 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 BLVRBP30043 206 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 HAAOP46952 286 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 AADACL3Q5VUY0 350 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 CTRB2Q6GPI1 263 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 LHFPL2Q6ZUX7 228 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 BPIFCQ8NFQ6 507 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 RNF141Q8WVD5 230 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 ADAT1Q9BUB4 502 aaKnown RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 MS4A7Q9GZW8 240 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 ELL3Q9HB65 397 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-209ENST00000466222 NGBQ9NPG2 151 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 MPC1Q9Y5U8 109 aa15.78■□□□□ 0.12
CAPN3-209ENST00000466222 DCHS2Q6V1P9 2916 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 DEFB108AA8MXU0 73 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 HOXA4Q00056 320 aaPredicted RBP15.77■□□□□ 0.12
CAPN3-209ENST00000466222 NUP37Q8NFH4 326 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 OR5T2Q8NGG2 359 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 HIST1H2AAQ96QV6 131 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 EHFQ9NZC4 300 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 PCDHB10Q9UN67 800 aa15.77■□□□□ 0.12
CAPN3-209ENST00000466222 C14orf166Q9Y224 244 aaKnown RBP15.77■□□□□ 0.12
CAPN3-209ENST00000466222 ANKHD1Q8IWZ3 2542 aaKnown RBP15.77■□□□□ 0.11
CAPN3-209ENST00000466222 IGHV3-13P01766 116 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 TUBG1P23258 451 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 KLF3P57682 345 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SUPT4H1P63272 117 aaKnown RBP15.76■□□□□ 0.11
CAPN3-209ENST00000466222 PDZK1IP1Q13113 114 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SLC9A3R2Q15599 337 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 ADIPOQQ15848 244 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 CHRFAM7AQ494W8 412 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SSX8Q7RTT4 187 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 OR5A2Q8NGI9 324 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 ARL11Q969Q4 196 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 ST6GALNAC5Q9BVH7 336 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 TUBG2Q9NRH3 451 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 EDARQ9UNE0 448 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 E7EQL1 145 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 OR4A8P0C604 315 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SRSF1Q07955 248 aaKnown RBP eCLIP15.76■□□□□ 0.11
CAPN3-209ENST00000466222 OR8G1Q15617 311 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SPRNQ5BIV9 151 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 SLC25A26Q70HW3 274 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF611Q8N823 705 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 ZSCAN4Q8NAM6 433 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-209ENST00000466222 OR1S2Q8NGQ3 325 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 AIFM2Q9BRQ8 373 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 CYTL1Q9NRR1 136 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 TAAR3PQ9P1P4 343 aa15.76■□□□□ 0.11
CAPN3-209ENST00000466222 IGLV3-9A0A075B6K5 115 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 H0YIZ8 118 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 TOR1AO14656 332 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 TAAR5O14804 337 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 SYNGR1O43759 233 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 SFTPBP07988 381 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 SERPINA2P20848 420 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 NPBWR2P48146 333 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 ANKRD55Q3KP44 614 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 HAGHLQ6PII5 290 aaPredicted RBP15.75■□□□□ 0.11
CAPN3-209ENST00000466222 C1orf174Q8IYL3 243 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 POC1AQ8NBT0 407 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 LILRB1Q8NHL6 650 aaPredicted RBP15.75■□□□□ 0.11
CAPN3-209ENST00000466222 MRPL24Q96A35 216 aaKnown RBP15.75■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF488Q96MN9 340 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 TECTBQ96PL2 329 aa15.75■□□□□ 0.11
CAPN3-209ENST00000466222 METTL8Q9H825 291 aaKnown RBP15.75■□□□□ 0.11
CAPN3-209ENST00000466222 TPD52L2O43399 206 aaKnown RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 RHBDL1O75783 438 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 GRPP07492 148 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 CD3EP07766 207 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 RPS2P15880 293 aaKnown RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 LOXP28300 417 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 IL15RAQ13261 267 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 EIF5AL1Q6IS14 154 aaKnown RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 ZCCHC24Q8N2G6 241 aaKnown RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 OR51F2Q8NH61 342 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 NKX6-2Q9C056 277 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 C1orf123Q9NWV4 160 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF581Q9P0T4 197 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-209ENST00000466222 DNASE2O00115 360 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms