RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 TOMM40LQ969M1 308 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 JAM3Q9BX67 310 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 FAM118AQ9NWS6 357 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 TAS2R4Q9NYW5 299 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 MOB4Q9Y3A3 225 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 AMMECR1Q9Y4X0 333 aaPredicted RBP16.56■□□□□ 0.24
CSPG5-204ENST00000465441 HSPE1-MOB4S4R3N1 261 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 TRAV39A0A0B4J263 110 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 IL1AP01583 271 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 LIMS3P0CW19 117 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 LIMS4P0CW20 117 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 RSU1Q15404 277 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 DRAM1Q8N682 238 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 OR56B4Q8NH76 319 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 APH1BQ8WW43 257 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 CPNE2Q96FN4 548 aaPredicted RBP16.55■□□□□ 0.24
CSPG5-204ENST00000465441 FAM192AQ9GZU8 254 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 PCDHB16Q9NRJ7 776 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 ZNF581Q9P0T4 197 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 ING4Q9UNL4 249 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 ZNF281Q9Y2X9 895 aa16.55■□□□□ 0.24
CSPG5-204ENST00000465441 A0A1W2PPI3 338 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 SLC35A2P78381 396 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 PAX5Q02548 391 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 KHDC1LQ5JSQ8 128 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 ZNF329Q86UD4 541 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 HAVCR2Q8TDQ0 301 aa16.54■□□□□ 0.24
CSPG5-204ENST00000465441 FGF20Q9NP95 211 aaPredicted RBP16.54■□□□□ 0.24
CSPG5-204ENST00000465441 PSMB11A5LHX3 300 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 EBAG9O00559 213 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 CDRT1O95170 752 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 KCNJ3P48549 501 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 GNG10P50151 68 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 MADCAM1Q13477 382 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 HES1Q14469 280 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 HNF4GQ14541 408 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 SMN1Q16637 294 aaKnown RBP16.53■□□□□ 0.24
CSPG5-204ENST00000465441 XAF1Q6GPH4 301 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 RPL22L1Q6P5R6 122 aaKnown RBP16.53■□□□□ 0.24
CSPG5-204ENST00000465441 SLC16A12Q6ZSM3 486 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 SUMF2Q8NBJ7 301 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 OR10A7Q8NGE5 316 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 GPR148Q8TDV2 347 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 RCC1LQ96I51 464 aaKnown RBP16.53■□□□□ 0.24
CSPG5-204ENST00000465441 DPCDQ9BVM2 203 aaPredicted RBP16.53■□□□□ 0.24
CSPG5-204ENST00000465441 S100A14Q9HCY8 104 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 ST3GAL6Q9Y274 331 aa16.53■□□□□ 0.24
CSPG5-204ENST00000465441 A0A1W2PPE3 182 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 K7EIL1 84 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 TMEM11P17152 192 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 SSTR5P35346 364 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 RAB7AP51149 207 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 KRTAP10-11P60412 298 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 CCDC58Q4VC31 144 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 OR8H3Q8N146 312 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 C5orf56Q8N8D9 126 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 NOL4LQ96MY1 436 aaPredicted RBP16.52■□□□□ 0.24
CSPG5-204ENST00000465441 METTL9Q9H1A3 318 aa16.52■□□□□ 0.24
CSPG5-204ENST00000465441 SIRT4Q9Y6E7 314 aaPredicted RBP16.52■□□□□ 0.24
CSPG5-204ENST00000465441 CD2P06729 351 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 GZMHP20718 246 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 ETV1P50549 477 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 OR2G6Q5TZ20 316 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 TMEM106AQ96A25 262 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 TMEM138Q9NPI0 162 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 LINC00527Q9UJ94 153 aa16.51■□□□□ 0.23
CSPG5-204ENST00000465441 WBP4O75554 376 aaKnown RBP16.5■□□□□ 0.23
CSPG5-204ENST00000465441 OR7C1O76099 320 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-204ENST00000465441 DUS4LO95620 317 aaKnown RBP16.5■□□□□ 0.23
CSPG5-204ENST00000465441 CLIC3O95833 236 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 IGKV1D-33P01593 117 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 IGKV1-33P01594 117 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 ZNF93P35789 620 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-204ENST00000465441 PQLC1Q8N2U9 271 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 LINC00482Q8N8I6 264 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 OR10X1Q8NGY0 326 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 OR52N1Q8NH53 320 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 ORAI1Q96D31 301 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 IFT22Q9H7X7 185 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 IL36GQ9NZH8 169 aa16.5■□□□□ 0.23
CSPG5-204ENST00000465441 GEMIN2O14893 280 aaKnown RBP16.49■□□□□ 0.23
CSPG5-204ENST00000465441 OGG1O15527 345 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 FGF16O43320 207 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 CSTBP04080 98 aaKnown RBP16.49■□□□□ 0.23
CSPG5-204ENST00000465441 DCKP27707 260 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 BDKRB2P30411 391 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 DEFB121Q5J5C9 76 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 NHLRC3Q5JS37 347 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 DDI2Q5TDH0 399 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 ETV3LQ6ZN32 361 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 C18orf65Q6ZTR6 163 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 MRPL41Q8IXM3 137 aaKnown RBP16.49■□□□□ 0.23
CSPG5-204ENST00000465441 CHPT1Q8WUD6 406 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 BABAM2Q9NXR7 383 aa16.49■□□□□ 0.23
CSPG5-204ENST00000465441 WI2-2373I1.2A0A1W2PRP0 233 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 SERPINE3A8MV23 424 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 IGHG2P01859 326 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 GAPDHP04406 335 aaKnown RBP16.48■□□□□ 0.23
CSPG5-204ENST00000465441 SERPINA2P20848 420 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 406.7 ms