RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CGB7P0DN87 165 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 C21orf33P30042 268 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-220ENST00000464800 TMED1Q13445 227 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 FHL3Q13643 280 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 LTC4SQ16873 150 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 AMIGO2Q86SJ2 522 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 OR51T1Q8NGJ9 327 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 OR8J1Q8NGP2 316 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 EME1Q96AY2 570 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 OSBPL10Q9BXB5 764 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 ABCG5Q9H222 651 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 IGHV1-3A0A0C4DH29 117 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 H0YJX3 145 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 ZNF816Q0VGE8 651 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-220ENST00000464800 EBI3Q14213 229 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 CDK5R1Q15078 307 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 PAN3Q58A45 887 aaKnown RBP11.43□□□□□ -0.58
MCF2L-220ENST00000464800 MOB3BQ86TA1 216 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 IZUMO1Q8IYV9 350 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 OR13C9Q8NGT0 318 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 OR2G2Q8NGZ5 317 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 RFKQ969G6 155 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-220ENST00000464800 MBOAT4Q96T53 435 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 RIBC2Q9H4K1 309 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 FRRS1LQ9P0K9 344 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
MCF2L-220ENST00000464800 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
MCF2L-220ENST00000464800 IGHV3-72A0A0B4J1Y9 119 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 NPIPB11E5RHQ5 1161 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 MPZL2O60487 215 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 MT-ND2P03891 347 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 GAPDHP04406 335 aaKnown RBP11.42□□□□□ -0.58
MCF2L-220ENST00000464800 ISG15P05161 165 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 VDAC1P21796 283 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 INSL3P51460 131 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 SLC16A12Q6ZSM3 486 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 KCTD20Q7Z5Y7 419 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 SBSPONQ8IVN8 264 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 Q8N9W7 124 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 OR13C3Q8NGS6 347 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 OR2T10Q8NGZ9 312 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 GABARAPL3Q9BY60 117 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 BARHL1Q9BZE3 327 aa11.42□□□□□ -0.58
MCF2L-220ENST00000464800 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
MCF2L-220ENST00000464800 SORL1Q92673 2214 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 A0A1W2PPE3 182 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 IGHG4P01861 327 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 TMEM225BP0DP42 221 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 DBTP11182 482 aaKnown RBP11.41□□□□□ -0.58
MCF2L-220ENST00000464800 SSTR5P35346 364 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 REG1BP48304 166 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 MTNR1BP49286 362 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 NANOS3P60323 173 aaKnown RBP11.41□□□□□ -0.58
MCF2L-220ENST00000464800 CFHR3Q02985 330 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 FAM27D1Q5T7N8 215 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 FDX2Q6P4F2 183 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 Q8N6K4 173 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 OR11H1Q8NG94 326 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 NR1H4Q96RI1 486 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-220ENST00000464800 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
MCF2L-220ENST00000464800 TRAV24A0A0B4J272 114 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 HCKP08631 526 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 OR8U8P0C7N1 319 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 FCGR1AP12314 374 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 PAX5Q02548 391 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 RSBN1Q5VWQ0 802 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-220ENST00000464800 OR51A4Q8NGJ6 313 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 OR10AC1Q8NH08 325 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 CNIH3Q8TBE1 160 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 RASL11BQ9BPW5 248 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 OAZ3Q9UMX2 235 aa11.4□□□□□ -0.58
MCF2L-220ENST00000464800 DAPL1A0PJW8 107 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 J3QRE1 110 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 SLC16A6O15403 523 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 MOSP00540 346 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 HTR1AP08908 422 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 OR5H8P0DN80 308 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 PSMB8P28062 276 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 KCNJ3P48549 501 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 CCR9P51686 369 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 ZP1P60852 638 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 KISS1Q15726 138 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 C1orf146Q5VVC0 180 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 OVCH2Q7RTZ1 564 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 PLPPR1Q8TBJ4 325 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 TRUB1Q8WWH5 349 aaKnown RBP11.39□□□□□ -0.59
MCF2L-220ENST00000464800 RNFT2Q96EX2 444 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 CENPNQ96H22 339 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-220ENST00000464800 S1PR3Q99500 378 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 ZCCHC4Q9H5U6 513 aa11.39□□□□□ -0.59
MCF2L-220ENST00000464800 ISYNA1Q9NPH2 558 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms