RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 OR4P4Q8NGL7 312 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 BLNKQ8WV28 456 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 RERGQ96A58 199 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 BTF3L4Q96K17 158 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 METTL26Q96S19 204 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 RNF5Q99942 180 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 NIPSNAP1Q9BPW8 284 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 EMC6Q9BV81 110 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 TLNRD1Q9H1K6 362 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 MS4A6AQ9H2W1 248 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 TRABDQ9H4I3 376 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 RRAGDQ9NQL2 400 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 MTFP1Q9UDX5 166 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 FBXO5Q9UKT4 447 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 NPHP4O75161 1426 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-205ENST00000464541 FLT4P35916 1363 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 IGLV1-36A0A0B4J1U3 117 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 VPS37CA5D8V6 355 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-205ENST00000464541 METTL15A6NJ78 407 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 UPK2O00526 184 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 REM1O75628 298 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 CCNKO75909 580 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 APCSP02743 223 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 ALOX5APP20292 161 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 PAX6P26367 422 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 TALDO1P37837 337 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 OPRK1P41145 380 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 TAS2R46P59540 309 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 RANP62826 216 aaKnown RBP3.04□□□□□ -1.92
PTCD3-205ENST00000464541 HBG1P69891 147 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 HBG2P69892 147 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
PTCD3-205ENST00000464541 KRR1Q13601 381 aaKnown RBP3.04□□□□□ -1.92
PTCD3-205ENST00000464541 YIF1BQ5BJH7 314 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 CLEC12AQ5QGZ9 265 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 FBXW12Q6X9E4 464 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 SLC51BQ86UW2 128 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 COX18Q8N8Q8 333 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 ASB13Q8WXK3 278 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 BIRC8Q96P09 236 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 DMAC2Q9NW81 257 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 GLTPQ9NZD2 209 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 VAX2Q9UIW0 290 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 S4R3C0 116 aa3.04□□□□□ -1.92
PTCD3-205ENST00000464541 TRAV8-2A0A0B4J237 113 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 A0A1B0GV72 72 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 ZNF850A8MQ14 1090 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 SNRPAP09012 282 aaKnown RBP3.03□□□□□ -1.92
PTCD3-205ENST00000464541 TSPOP30536 169 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 SLC18A1P54219 525 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 RAB25P57735 213 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 UBE2NP61088 152 aaKnown RBP3.03□□□□□ -1.92
PTCD3-205ENST00000464541 IFITM3Q01628 133 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 PRDX1Q06830 199 aaKnown RBP3.03□□□□□ -1.92
PTCD3-205ENST00000464541 INCA1Q0VD86 236 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 OR2F1Q13607 317 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 EDDM3AQ14507 147 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 C4orf26Q17RF5 130 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 CEACAM16Q2WEN9 425 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 ATP6AP1LQ52LC2 224 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 ORMDL2Q53FV1 153 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 HIST2H3PS2Q5TEC6 136 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 KCTD16Q68DU8 428 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 DNAJC24Q6P3W2 148 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 OSR2Q8N2R0 312 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 GATD1Q8NB37 220 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 OR4C13Q8NGP0 309 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 OR10G6Q8NH81 332 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 HAVCR2Q8TDQ0 301 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTCD3-205ENST00000464541 TIPINQ9BVW5 301 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 PECRQ9BY49 303 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 C6orf62Q9GZU0 229 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-205ENST00000464541 EDA2RQ9HAV5 297 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 ZNF391Q9UJN7 358 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 POLR1DQ9Y2S0 133 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
PTCD3-205ENST00000464541 SNAPC4Q5SXM2 1469 aa3.03□□□□□ -1.93
PTCD3-205ENST00000464541 RIMS2Q9UQ26 1411 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 A0A1W2PP64 1363 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 ZBED9Q6R2W3 1325 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 LOC105371267A0A1B0GV96 52 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CLDN24A6NM45 220 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 NDUFS5O43920 106 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CNIH1O95406 144 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CCNE2O96020 404 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 HLA-DQA1P01909 254 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 IL4P05112 153 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 HMGN1P05114 100 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 LINC00614P0C842 121 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 RNASE2P10153 161 aaKnown RBP3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CD36P16671 472 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 M6PRP20645 277 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CXCR1P25024 350 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CCR7P32248 378 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 APLNRP35414 380 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CXCL12P48061 93 aa3.02□□□□□ -1.93
PTCD3-205ENST00000464541 CCL23P55773 120 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms