RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 HSPB6O14558 160 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PIN1P1O15428 100 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 OGG1O15527 345 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 ETV1P50549 477 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 RAB7AP51149 207 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PPP3R1P63098 170 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 MADCAM1Q13477 382 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PIGYQ3MUY2 71 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 LINC00596Q86U02 117 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 ZNF555Q8NEP9 628 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 SGCDQ92629 289 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 TOMM40LQ969M1 308 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PHF21AQ96BD5 680 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 DPCDQ9BVM2 203 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 METTL9Q9H1A3 318 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PAK1IP1Q9NWT1 392 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 SMPD3Q9NY59 655 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 PSG11Q9UQ72 335 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 HSPE1-MOB4S4R3N1 261 aa11.43□□□□□ -0.58
SNRNP40-203ENST00000463988 A0A1W2PRX2 142 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 ZNF780AO75290 641 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 HTR3BO95264 441 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 PF4V1P10720 104 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 CD33P20138 364 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 GZMHP20718 246 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 LOXL3P58215 753 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 XAF1Q6GPH4 301 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 OR8H3Q8N146 312 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 OSR2Q8N2R0 312 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 SUMF2Q8NBJ7 301 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 OR10K1Q8NGX5 313 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 SMIM19Q96E16 107 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 BABAM2Q9NXR7 383 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 ZNF281Q9Y2X9 895 aa11.42□□□□□ -0.58
SNRNP40-203ENST00000463988 A0A1W2PPI3 338 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 FGF16O43320 207 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 GPX5O75715 221 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 CDRT1O95170 752 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 CSTBP04080 98 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 SNRNP70P08621 437 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 BDKRB2P30411 391 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 ZNF93P35789 620 aaPredicted RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 DDI2Q5TDH0 399 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 OR2G6Q5TZ20 316 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 OR52M1Q8NGK5 317 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 OR56B4Q8NH76 319 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 LEAP2Q969E1 77 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 S100A13Q99584 98 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 ING4Q9UNL4 249 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 SIRT4Q9Y6E7 314 aaPredicted RBP11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
SNRNP40-203ENST00000463988 TRBV5-5A0A0J9YX44 114 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 DUS4LO95620 317 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 PF4P02776 101 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 IGFBP3P17936 291 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 MYL12AP19105 171 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 SSTR5P35346 364 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 SLC35A2P78381 396 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 C9orf152Q5JTZ5 239 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 OR10X1Q8NGY0 326 aa11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-203ENST00000463988 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 EBAG9O00559 213 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 BAG2O95816 211 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 CLIC3O95833 236 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 GTF2F2P13984 249 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 IGLL1P15814 213 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 TMEM11P17152 192 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF816Q0VGE8 651 aaPredicted RBP11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 MED21Q13503 144 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 RIPK1Q13546 671 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 EBI3Q14213 229 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 GPR176Q14439 515 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 LTC4SQ16873 150 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 TTC23Q5W5X9 447 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms