RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A10PA6NDY2 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A18PA6NE21 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A16PA6NEW6 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A20PA6NIJ5 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A8PA6NJQ4 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A7PA6NKC0 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A22PA8MWA6 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A12PA8MX19 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A5PA8MXJ8 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A23PA8MXZ1 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A15PP0C7V4 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A13PP0C7W8 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A14PP0C7W9 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM90A24PP0C7X0 464 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 ASCL1P50553 236 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 ZNF528Q3MIS6 628 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 FAM214BQ7L5A3 538 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 RALGAPA2Q2PPJ7 1873 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 ADAP1O75689 374 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 NAT1P18440 290 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 RFLNBQ8N5W9 214 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
CHRNA4-202ENST00000463705 IGLV1-36A0A0B4J1U3 117 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 CRYBA1P05813 215 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 CXCL3P19876 107 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 DYNLT3P51808 116 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 PSG4Q00888 419 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 MOGAT2Q3SYC2 334 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 PPP1R3EQ9H7J1 279 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 COX6A1P12074 109 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 POLR2GP62487 172 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 FNDC7Q5VTL7 733 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 CLCF1Q9UBD9 225 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 HPXP02790 462 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 CLDN34H7C241 214 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 OR4A8P0C604 315 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 GNG4P50150 75 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 EFNB2P52799 333 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 TPPP2P59282 170 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 IFITM3Q01628 133 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 VAX1Q5SQQ9 334 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 OPN4Q9UHM6 478 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 IGLV3-19P01714 112 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 TNXAQ16473 311 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 RNF212Q495C1 297 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 TECRQ9NZ01 308 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
CHRNA4-202ENST00000463705 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 SMIM17P0DL12 118 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 IL11P20809 199 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 PNRC1Q12796 327 aaPredicted RBP11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 WNT2BQ93097 391 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 MEX3AA1L020 520 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 NQO2P16083 231 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 NTF3P20783 257 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 SULT1A1P50225 295 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 PAX5Q02548 391 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 ZNF345Q14585 488 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 NIT2Q9NQR4 276 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 WIPI2Q9Y4P8 454 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 GOSR1O95249 250 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 RIPPLY2Q5TAB7 128 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 KLK13Q9UKR3 277 aa11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 MRPS18BQ9Y676 258 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-202ENST00000463705 CELA2AP08217 269 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 COX5BP10606 129 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 FGF12P61328 243 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 TGIF2LXQ8IUE1 241 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 ZNF519Q8TB69 540 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 SCMH1Q96GD3 660 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 ZNF883P0CG24 379 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 GALR1P47211 349 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 PCOLCEQ15113 449 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
CHRNA4-202ENST00000463705 CHST1O43916 411 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 CTSBP07858 339 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 MGAT2Q10469 447 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms