RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HTR1FP30939 366 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 SOX6P35712 828 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 AADACL4Q5VUY2 407 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 TMEM244Q5VVB8 128 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 Q8N6K4 173 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 TCEANCQ8N8B7 351 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 OR5D18Q8NGL1 313 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 KCTD7Q96MP8 289 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 VSIG4Q9Y279 399 aa11.26□□□□□ -0.61
SMC1A-204ENST00000463684 A0A1W2PQL4 384 aaPredicted RBP11.25□□□□□ -0.61
SMC1A-204ENST00000463684 NPIPB11E5RHQ5 1161 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 H0YJX3 145 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 I3L521 148 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 FAM107AO95990 144 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 MOSP00540 346 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 IGF1P05019 195 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 OR2T7P0C7T2 308 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 HOXB6P17509 224 aaKnown RBP11.25□□□□□ -0.61
SMC1A-204ENST00000463684 CD1BP29016 333 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 ZP1P60852 638 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 RUNX1Q01196 453 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 GABPB1Q06547 395 aaPredicted RBP11.25□□□□□ -0.61
SMC1A-204ENST00000463684 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 PAN3Q58A45 887 aaKnown RBP11.25□□□□□ -0.61
SMC1A-204ENST00000463684 GID4Q8IVV7 300 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 ADGRG5Q8IZF4 528 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 ZNF491Q8N8L2 437 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 TMEM163Q8TC26 289 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 MRGPRDQ8TDS7 321 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 CANT1Q8WVQ1 401 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 NR1H4Q96RI1 486 aaPredicted RBP11.25□□□□□ -0.61
SMC1A-204ENST00000463684 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 CHCHD6Q9BRQ6 235 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
SMC1A-204ENST00000463684 TRIM64CA6NLI5 447 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 DBTP11182 482 aaKnown RBP11.24□□□□□ -0.61
SMC1A-204ENST00000463684 ATP6V1E1P36543 226 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 VEGFCP49767 419 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 ISL1P61371 349 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 SRSF7Q16629 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMC1A-204ENST00000463684 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 FAM220AQ7Z4H9 259 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 MYOZ3Q8TDC0 251 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 ASB9Q96DX5 294 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 KRTAP17-1Q9BYP8 105 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
SMC1A-204ENST00000463684 GNG8Q9UK08 70 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 KIAA2026Q5HYC2 2103 aa11.24□□□□□ -0.61
SMC1A-204ENST00000463684 M0R129 80 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 DCTN3O75935 186 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 MT-ND2P03891 347 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 IL3RAP26951 378 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 SSTR5P35346 364 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 KIR3DL2P43630 455 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 GNB1P62873 340 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 EFNB1P98172 346 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 OR10H4Q8NGA5 316 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 CNIH3Q8TBE1 160 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 CCDC124Q96CT7 223 aaKnown RBP11.23□□□□□ -0.61
SMC1A-204ENST00000463684 IL4I1Q96RQ9 567 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
SMC1A-204ENST00000463684 STARD9Q9P2P6 4700 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 APOL3O95236 402 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 GZMHP20718 246 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 KCNJ3P48549 501 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 MTNR1BP49286 362 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 F2RL1P55085 397 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 RSBN1Q5VWQ0 802 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 FAM53AQ6NSI3 398 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 FAM71E2Q8N5Q1 922 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 TMEM104Q8NE00 496 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 OR13C9Q8NGT0 318 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 RTN4IP1Q8WWV3 396 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 ST6GALNAC6Q969X2 333 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 UTP4Q969X6 686 aaKnown RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 MBOAT4Q96T53 435 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 OR51J1Q9H342 316 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 ZNF107Q9UII5 783 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-204ENST00000463684 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 ARL2BPQ9Y2Y0 163 aa11.22□□□□□ -0.61
SMC1A-204ENST00000463684 TRAV39A0A0B4J263 110 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 TRAV24A0A0B4J272 114 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 AQP12BA6NM10 295 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 ISG15P05161 165 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 IGHV4-30-4P0DP06 118 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 RAB9AP51151 201 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms