RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CD34P28906 385 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 MAP2K4P45985 399 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 POU3F4P49335 361 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 MTCP1P56278 107 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 YIF1BQ5BJH7 314 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 C10orf99Q6UWK7 81 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 BAIAP2L2Q6UXY1 529 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 OSR2Q8N2R0 312 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 SVOPQ8N4V2 548 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 LINC00482Q8N8I6 264 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 DPF1Q92782 380 aa15.74■□□□□ 0.11
VARS-221ENST00000463184 EXOSC4Q9NPD3 245 aaKnown RBP15.74■□□□□ 0.11
VARS-221ENST00000463184 PNMA8CA0A1B0GUJ8 204 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 TOR1AO14656 332 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 PRKACBP22694 351 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 PRRX1P54821 245 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 SNU13P55769 128 aaKnown RBP15.73■□□□□ 0.11
VARS-221ENST00000463184 CD69Q07108 199 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 GPR50Q13585 617 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 KCTD21Q4G0X4 260 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 SERPINA12Q8IW75 414 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 PARP16Q8N5Y8 322 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 OR51D1Q8NGF3 324 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 HMG20AQ9NP66 347 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 ACOT13Q9NPJ3 140 aa15.73■□□□□ 0.11
VARS-221ENST00000463184 IGKV1-9A0A0C4DH69 117 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 TRBV5-5A0A0J9YX44 114 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 SH2D7A6NKC9 451 aaPredicted RBP15.72■□□□□ 0.11
VARS-221ENST00000463184 OOSP1A8MZH6 123 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 BUB1B-PAK6H3BSN5 160 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 SIRPB1O00241 398 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 OR2H2O95918 312 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 CD2P06729 351 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 OCM2P0CE71 109 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 CALCBP10092 127 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 ATF1P18846 271 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 LMO1P25800 156 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 HOXD3P31249 432 aaPredicted RBP15.72■□□□□ 0.11
VARS-221ENST00000463184 MNDAP41218 407 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 SOX2P48431 317 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 MLLT11Q13015 90 aaPredicted RBP15.72■□□□□ 0.11
VARS-221ENST00000463184 PDZK1IP1Q13113 114 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 HLA-DRB5Q30154 266 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 C9orf152Q5JTZ5 239 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 TPTE2P1Q5T6R2 138 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 CCDC144NLQ6NUI1 221 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 LHFPL2Q6ZUX7 228 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 ZNF367Q7RTV3 350 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 SPARTQ8N0X7 666 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 OR4D6Q8NGJ1 314 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 OR5D14Q8NGL3 314 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 WWC2-AS2Q96NR7 200 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 B9D2Q9BPU9 175 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 ZCCHC4Q9H5U6 513 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 ZNF286AQ9HBT8 521 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 GSTK1Q9Y2Q3 226 aa15.72■□□□□ 0.11
VARS-221ENST00000463184 KIAA2026Q5HYC2 2103 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 A0A087X0M5 115 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 A0A1B0GX30 115 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 FAM172BPA6NC97 362 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 LY6LH3BQJ8 138 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 FAM106CPP0CH98 169 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 HSMCR30P0CW71 290 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 VSIG8P0DPA2 414 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 GDNFP39905 211 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 GLIPR1P48060 266 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 RPS11P62280 158 aaKnown RBP eCLIP15.71■□□□□ 0.11
VARS-221ENST00000463184 AESQ08117 197 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 DCTN2Q13561 401 aaKnown RBP15.71■□□□□ 0.11
VARS-221ENST00000463184 TPBGQ13641 420 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 Q499Y3 187 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 ZNF773Q6PK81 442 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 MRPL41Q8IXM3 137 aaKnown RBP15.71■□□□□ 0.11
VARS-221ENST00000463184 MS4A15Q8N5U1 240 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 UFD1Q92890 307 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 MGLLQ99685 303 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 MCRIP2Q9BUT9 160 aaKnown RBP15.71■□□□□ 0.11
VARS-221ENST00000463184 NEK6Q9HC98 313 aa15.71■□□□□ 0.11
VARS-221ENST00000463184 PSMB11A5LHX3 300 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 PTGFRP43088 359 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 THNSL2Q86YJ6 484 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 OR13C5Q8NGS8 318 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 OR13C9Q8NGT0 318 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 TMEM106AQ96A25 262 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 SPSB1Q96BD6 273 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 RHOFQ9HBH0 211 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 MOB4Q9Y3A3 225 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 DNAH9Q9NYC9 4486 aa15.7■□□□□ 0.1
VARS-221ENST00000463184 ODAMA1E959 279 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A18PA6NE21 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A16PA6NEW6 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A20PA6NIJ5 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A9PA6NNJ1 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A12PA8MX19 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A5PA8MXJ8 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 KDM4BO94953 1096 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 TNFAIP8O95379 198 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 CSN2P05814 226 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A15PP0C7V4 464 aa15.69■□□□□ 0.1
VARS-221ENST00000463184 FAM90A13PP0C7W8 464 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms