RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SLC25A45Q8N413 288 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 MIR7-3HGQ8N6C7 128 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 TMEM105Q8N8V8 129 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 OR8J2Q8NGG1 315 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 CASTOR1Q8WTX7 329 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 ITLN2Q8WWU7 325 aaPredicted RBP2.42□□□□□ -2.02
USH2A-203ENST00000463147 OLFM3Q96PB7 478 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 IP6K3Q96PC2 410 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 RBP7Q96R05 134 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 DOK1Q99704 481 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 API5Q9BZZ5 524 aaKnown RBP2.42□□□□□ -2.02
USH2A-203ENST00000463147 ARAP3Q8WWN8 1544 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 NCOA1Q15788 1441 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 ARHGAP31Q2M1Z3 1444 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 MYOM3Q5VTT5 1437 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 RIMS2Q9UQ26 1411 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 NCOA3Q9Y6Q9 1424 aa2.42□□□□□ -2.02
USH2A-203ENST00000463147 BAZ1AQ9NRL2 1556 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 UHRF1BP1LA0JNW5 1464 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 TMEM250H0YL14 139 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 K7EPK0 472 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 PHYHO14832 338 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 TCF21O43680 179 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 SLC37A4O43826 429 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 OR7C2O60412 319 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 ZNF324O75467 553 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 MED6O75586 246 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 OR5AC1P0C628 307 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 ADORA1P30542 326 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 MLLT11Q13015 90 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 SLC36A2Q495M3 483 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 ELP2Q6IA86 826 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 UNQ9165/PRO28630Q6UXU0 137 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 TIFABQ6ZNK6 161 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 FAM19A5Q7Z5A7 132 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 ZFP62Q8NB50 900 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 ZNRF2Q8NHG8 242 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 TWIST2Q8WVJ9 160 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 MAL2Q969L2 176 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 PPWD1Q96BP3 646 aaKnown RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 PPCDCQ96CD2 204 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 YPEL4Q96NS1 127 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 ANAPC13Q9BS18 74 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 THTPAQ9BU02 230 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 SPZ1Q9BXG8 430 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 UGT2B28Q9BY64 529 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 PLA2G12AQ9BZM1 189 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 FAM60AQ9NP50 221 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 DMAC2Q9NW81 257 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 COMMD9Q9P000 198 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 TAC3Q9UHF0 121 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 POMPQ9Y244 141 aa2.41□□□□□ -2.02
USH2A-203ENST00000463147 POLR1AO95602 1720 aaPredicted RBP2.41□□□□□ -2.02
USH2A-203ENST00000463147 NLRP1Q9C000 1473 aa2.4□□□□□ -2.02
USH2A-203ENST00000463147 MAP3K5Q99683 1374 aa2.4□□□□□ -2.02
USH2A-203ENST00000463147 COLCA2A8K830 154 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 ZNF850A8MQ14 1090 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 C16orf90A8MZG2 172 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 CCRL2O00421 344 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 SNRPAP09012 282 aaKnown RBP2.4□□□□□ -2.03
USH2A-203ENST00000463147 CGB3P0DN86 165 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 CGB7P0DN87 165 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 UGT2B7P16662 529 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 NPY1RP25929 384 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 SLC6A1P30531 599 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 MOBPQ13875 183 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 EBI3Q14213 229 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 HES3Q5TGS1 186 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 SPATA31B1PQ5VZV4 182 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 DNM1P34Q6PK57 102 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 TBPL2Q6SJ96 375 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 OR4P4Q8NGL7 312 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 OR5H2Q8NGV7 314 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 STOML3Q8TAV4 291 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 PPP1R36Q96LQ0 422 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 FOPNLQ96NB1 174 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 TSSK6Q9BXA6 273 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 MS4A6AQ9H2W1 248 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 SOGA1O94964 1423 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 MIA2Q96PC5 1412 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 MYO5BQ9ULV0 1848 aa2.4□□□□□ -2.03
USH2A-203ENST00000463147 NUP205Q92621 2012 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ROCK1Q13464 1354 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 MTUS2Q5JR59 1369 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ANKRD36BQ8N2N9 1353 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ANKRD30AQ9BXX3 1397 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 KIF15Q9NS87 1388 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ZMYM4Q5VZL5 1548 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 IZUMO1RA6ND01 250 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 METTL15A6NJ78 407 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 CD300LBA8K4G0 201 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 C9JQL5 133 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 AZIN1O14977 448 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 DEXIO95424 95 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 CXorf1O96002 111 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ATF1P18846 271 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 F8A1P23610 371 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms