RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 JUNBP17275 347 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 IGFBP3P17936 291 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 NFYBP25208 207 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 GDNFP39905 211 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 VDAC2P45880 294 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 TAS2R43P59537 309 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 ST3GAL4Q11206 333 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 LRRC36Q1X8D7 754 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 MPV17LQ2QL34 196 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 Q499Y3 187 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 YIF1BQ5BJH7 314 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 DDI2Q5TDH0 399 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 RSBN1Q5VWQ0 802 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 XAF1Q6GPH4 301 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 Q6ZS46 218 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 CENPVQ7Z7K6 275 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 SUMF2Q8NBJ7 301 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 ZNF485Q8NCK3 441 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 OR4F17Q8NGA8 305 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 OR10K1Q8NGX5 313 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 MRPS24Q96EL2 167 aaKnown RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 KIRREL1Q96J84 757 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 OR4F4Q96R69 305 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 DPCDQ9BVM2 203 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 FAM192AQ9GZU8 254 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 MMP28Q9H239 520 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 PPIL3Q9H2H8 161 aaKnown RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 PLCXD1Q9NUJ7 323 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 CALYQ9NYX4 217 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 IDI2-AS1Q9NZ38 188 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 CNOT2Q9NZN8 540 aaKnown RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 CKLFQ9UBR5 152 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 AMMECR1Q9Y4X0 333 aaPredicted RBP5.83□□□□□ -1.48
PTPRF-210ENST00000463041 DNAH3Q8TD57 4116 aa5.83□□□□□ -1.48
PTPRF-210ENST00000463041 HSPB6O14558 160 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR7C1O76099 320 aaPredicted RBP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 LALBAP00709 142 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 GTF2F2P13984 249 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 CD24P25063 80 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 CAPGP40121 348 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 GLP1RP43220 463 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR3A4PP47883 348 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RAB7AP51149 207 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RBM11P57052 281 aaKnown RBP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RPS11P62280 158 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 CD83Q01151 205 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 MADCAM1Q13477 382 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RIPK1Q13546 671 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RCN1Q15293 331 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 NSUN5P1Q3KNT7 163 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 PIGYQ3MUY2 71 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 C8orf59Q8N0T1 100 aaPredicted RBP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR8H3Q8N146 312 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 STX19Q8N4C7 294 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR5AU1Q8NGC0 362 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR52M1Q8NGK5 317 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR13A1Q8NGR1 328 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RFESDQ8TAC1 157 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 PLPPR1Q8TBJ4 325 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 THRSPQ92748 146 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 RPEQ96AT9 228 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 OR5M11Q96RB7 305 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 ZNF184Q99676 751 aaPredicted RBP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 CITED2Q99967 270 aaPredicted RBP5.82□□□□□ -1.48
PTPRF-210ENST00000463041 SLC25A33Q9BSK2 321 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 SPACA1Q9HBV2 294 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 PSORS1C1Q9UIG5 152 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 PSG11Q9UQ72 335 aa5.82□□□□□ -1.48
PTPRF-210ENST00000463041 TRBV5-7A0A0A0MS05 114 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 TMEM30CPA0ZSE6 113 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 FAM172BPA6NC97 362 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 MCRIP1C9JLW8 97 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 GEMIN2O14893 280 aaKnown RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 CASQ2O14958 399 aaPredicted RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 ORC5O43913 435 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 MT-ND4P03905 459 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 GAPDHP04406 335 aaKnown RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 AMY1AP04745 511 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 AMY2AP04746 511 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 GLAP06280 429 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 FSTP19883 344 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 SERPINA2P20848 420 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 DOC2BQ14184 412 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 RBM39Q14498 530 aaKnown RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 SLC22A6Q4U2R8 563 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 ABCA11PQ4W5N1 156 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 ATAD3CQ5T2N8 411 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 KPRPQ5T749 579 aaPredicted RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 OGFRL1Q5TC84 451 aaPredicted RBP5.81□□□□□ -1.48
PTPRF-210ENST00000463041 RNLSQ5VYX0 342 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 NANOGP1Q8N7R0 232 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 C8orf31Q8N9H6 132 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 WFDC9Q8NEX5 89 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 MRGPRDQ8TDS7 321 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 FBLIM1Q8WUP2 373 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 TOMM40LQ969M1 308 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 ARL11Q969Q4 196 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 R3HDM4Q96D70 268 aa5.81□□□□□ -1.48
PTPRF-210ENST00000463041 PGLYRP3Q96LB9 341 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms