RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 WDR5BQ86VZ2 330 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 GAPTQ8N292 157 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 ZFP62Q8NB50 900 aaPredicted RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 OR5C1Q8NGR4 320 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 CPNE4Q96A23 557 aaPredicted RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 RAB39BQ96DA2 213 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 GNPNAT1Q96EK6 184 aaPredicted RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 SGCZQ96LD1 299 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 ATP5SQ99766 215 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 PAPOLGQ9BWT3 736 aaKnown RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 LINC00470Q9BZP3 86 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 MAGT1Q9H0U3 335 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 HIPK2Q9H2X6 1198 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 UNKLQ9H9P5 680 aaKnown RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 GSN-AS1Q9NRJ2 163 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 MRPS18CQ9Y3D5 142 aaKnown RBP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 LIPGQ9Y5X9 500 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
SREBF2-204ENST00000462539 A0A0C4DFX4 3053 aa6.34□□□□□ -1.39
SREBF2-204ENST00000462539 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TRBV6-6A0A0A6YYG2 114 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 IGKV1-6A0A0C4DH72 117 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 KIR2DS1A0A191URI9 304 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 PINLYPA6NC86 204 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 H0YL77 283 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TXNL1O43396 289 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TMEM50AO95807 157 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 HBE1P02100 147 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TK1P04183 234 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 WNT2P09544 360 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 SCTP09683 121 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 RFPL3SP0C7P2 107 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 COX5BP10606 129 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CCL4P13236 92 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 OMGP23515 440 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ITGA3P26006 1051 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 KIR2DS4P43632 304 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 PAX9P55771 341 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TAS2R30P59541 319 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 OR2B8PP59922 312 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 UBE2KP61086 200 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 HLA-DRB3P79483 266 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 RUNX1Q01196 453 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZFP36L1Q07352 338 aaKnown RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 Q0VFX4 171 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF154Q13106 437 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 KIAA0141Q14154 515 aaPredicted RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 KIR2DS1Q14954 304 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 HAGHQ16775 308 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ACER2Q5QJU3 275 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 AKR1C8PQ5T2L2 129 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 PMS2CLQ68D20 193 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZDHHC23Q8IYP9 409 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF295-AS1Q8N0V1 137 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 IL22RA1Q8N6P7 574 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CPEB3Q8NE35 698 aaKnown RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CLDND2Q8NHS1 167 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 MRPL30Q8TCC3 161 aaKnown RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF845Q96IR2 970 aaPredicted RBP6.33□□□□□ -1.4
SREBF2-204ENST00000462539 HS3ST6Q96QI5 342 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CABLES2Q9BTV7 478 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CALHM2Q9HA72 323 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 SIRT7Q9NRC8 400 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 CCL28Q9NRJ3 127 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 DEPPQ9NTK1 212 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TAAR3PQ9P1P4 343 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 IL36RNQ9UBH0 155 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 PILRBQ9UKJ0 227 aa6.33□□□□□ -1.4
SREBF2-204ENST00000462539 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 A0A0G2JRQ6 117 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF727A8MUV8 499 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 WRBO00258 174 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 DFFBO76075 338 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CST7O76096 145 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 NXPH3O95157 252 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CXCL1P09341 107 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 FBP1P09467 338 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CTXN2P0C2S0 81 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 SLC25A6P12236 298 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 HOXA5P20719 270 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 VDAC1P21796 283 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 S100PP25815 95 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GDF1P27539 372 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 TAGLN2P37802 199 aaKnown RBP6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GPM6AP51674 278 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GFRA1P56159 465 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ARF1P84077 181 aaKnown RBP6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CEACAM21Q3KPI0 293 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 KHDC3LQ587J8 217 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 NCMAPQ5T1S8 102 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ADAM5Q6NVV9 412 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF880Q6PDB4 577 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 MRPL21Q7Z2W9 205 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms