RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CCDC54Q8NEL0 328 aa11.7□□□□□ -0.54
APP-211ENST00000462267 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
APP-211ENST00000462267 APOL4Q9BPW4 351 aa11.7□□□□□ -0.54
APP-211ENST00000462267 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
APP-211ENST00000462267 FGFR1OP2Q9NVK5 253 aa11.7□□□□□ -0.54
APP-211ENST00000462267 SAMHD1Q9Y3Z3 626 aaKnown RBP11.7□□□□□ -0.54
APP-211ENST00000462267 HECTD4Q9Y4D8 3996 aa11.69□□□□□ -0.54
APP-211ENST00000462267 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
APP-211ENST00000462267 A0A087WW49 117 aa11.69□□□□□ -0.54
APP-211ENST00000462267 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
APP-211ENST00000462267 A0A1W2PPE3 182 aa11.69□□□□□ -0.54
APP-211ENST00000462267 ARPC1BO15143 372 aaKnown RBP11.69□□□□□ -0.54
APP-211ENST00000462267 LGALS1P09382 135 aaKnown RBP11.69□□□□□ -0.54
APP-211ENST00000462267 HTR1FP30939 366 aa11.69□□□□□ -0.54
APP-211ENST00000462267 MAGEA2P43356 314 aa11.69□□□□□ -0.54
APP-211ENST00000462267 PDZK1IP1Q13113 114 aa11.69□□□□□ -0.54
APP-211ENST00000462267 GINS1Q14691 196 aa11.69□□□□□ -0.54
APP-211ENST00000462267 LTC4SQ16873 150 aa11.69□□□□□ -0.54
APP-211ENST00000462267 ZNF322Q6U7Q0 402 aaPredicted RBP11.69□□□□□ -0.54
APP-211ENST00000462267 OR51T1Q8NGJ9 327 aa11.69□□□□□ -0.54
APP-211ENST00000462267 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
APP-211ENST00000462267 C10orf35Q96D05 121 aa11.69□□□□□ -0.54
APP-211ENST00000462267 LRGUKQ96M69 825 aa11.69□□□□□ -0.54
APP-211ENST00000462267 FAM110AQ9BQ89 295 aa11.69□□□□□ -0.54
APP-211ENST00000462267 TMED9Q9BVK6 235 aa11.69□□□□□ -0.54
APP-211ENST00000462267 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
APP-211ENST00000462267 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
APP-211ENST00000462267 TRAV41A0A0B4J266 112 aa11.68□□□□□ -0.54
APP-211ENST00000462267 DEGS1O15121 323 aa11.68□□□□□ -0.54
APP-211ENST00000462267 KDM4BO94953 1096 aa11.68□□□□□ -0.54
APP-211ENST00000462267 PLEKHG7Q6ZR37 379 aa11.68□□□□□ -0.54
APP-211ENST00000462267 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
APP-211ENST00000462267 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
APP-211ENST00000462267 RTN4IP1Q8WWV3 396 aaPredicted RBP11.68□□□□□ -0.54
APP-211ENST00000462267 PP6455Q8WZ26 134 aa11.68□□□□□ -0.54
APP-211ENST00000462267 RSRP1Q9BUV0 290 aa11.68□□□□□ -0.54
APP-211ENST00000462267 ST6GALNAC5Q9BVH7 336 aa11.68□□□□□ -0.54
APP-211ENST00000462267 ZCCHC4Q9H5U6 513 aa11.68□□□□□ -0.54
APP-211ENST00000462267 REEP1Q9H902 201 aa11.68□□□□□ -0.54
APP-211ENST00000462267 CEPT1Q9Y6K0 416 aa11.68□□□□□ -0.54
APP-211ENST00000462267 IGKV1-12A0A0C4DH73 117 aa11.67□□□□□ -0.54
APP-211ENST00000462267 ZNF736B4DX44 427 aaPredicted RBP11.67□□□□□ -0.54
APP-211ENST00000462267 H0Y980 276 aa11.67□□□□□ -0.54
APP-211ENST00000462267 ATP6V0E1O15342 81 aa11.67□□□□□ -0.54
APP-211ENST00000462267 MAGEB4O15481 346 aaPredicted RBP11.67□□□□□ -0.54
APP-211ENST00000462267 CCDC22O60826 627 aa11.67□□□□□ -0.54
APP-211ENST00000462267 IGKV1D-12P01611 117 aa11.67□□□□□ -0.54
APP-211ENST00000462267 HSPB1P04792 205 aaKnown RBP11.67□□□□□ -0.54
APP-211ENST00000462267 PRKACBP22694 351 aa11.67□□□□□ -0.54
APP-211ENST00000462267 CXCR4P61073 352 aa11.67□□□□□ -0.54
APP-211ENST00000462267 ODF4Q2M2E3 257 aa11.67□□□□□ -0.54
APP-211ENST00000462267 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
APP-211ENST00000462267 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
APP-211ENST00000462267 MINDY2Q8NBR6 621 aa11.67□□□□□ -0.54
APP-211ENST00000462267 OR10G2Q8NGC3 310 aa11.67□□□□□ -0.54
APP-211ENST00000462267 MBOAT4Q96T53 435 aa11.67□□□□□ -0.54
APP-211ENST00000462267 FEVQ99581 238 aa11.67□□□□□ -0.54
APP-211ENST00000462267 ADI1Q9BV57 179 aa11.67□□□□□ -0.54
APP-211ENST00000462267 BARHL1Q9BZE3 327 aa11.67□□□□□ -0.54
APP-211ENST00000462267 CCDC182A6NF36 153 aa11.66□□□□□ -0.54
APP-211ENST00000462267 SLC2A2P11168 524 aaPredicted RBP11.66□□□□□ -0.54
APP-211ENST00000462267 IL3RAP26951 378 aa11.66□□□□□ -0.54
APP-211ENST00000462267 CDK5Q00535 292 aa11.66□□□□□ -0.54
APP-211ENST00000462267 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
APP-211ENST00000462267 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
APP-211ENST00000462267 C8orf31Q8N9H6 132 aa11.66□□□□□ -0.54
APP-211ENST00000462267 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
APP-211ENST00000462267 CNN2Q99439 309 aaKnown RBP11.66□□□□□ -0.54
APP-211ENST00000462267 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
APP-211ENST00000462267 IGKV1-9A0A0C4DH69 117 aa11.65□□□□□ -0.54
APP-211ENST00000462267 TXNL1O43396 289 aa11.65□□□□□ -0.54
APP-211ENST00000462267 HLA-DRB1P01911 266 aa11.65□□□□□ -0.54
APP-211ENST00000462267 FSTP19883 344 aa11.65□□□□□ -0.54
APP-211ENST00000462267 PAX5Q02548 391 aa11.65□□□□□ -0.54
APP-211ENST00000462267 OR2T5Q6IEZ7 315 aa11.65□□□□□ -0.54
APP-211ENST00000462267 HDXQ7Z353 690 aa11.65□□□□□ -0.54
APP-211ENST00000462267 OR2T29Q8NH02 315 aa11.65□□□□□ -0.54
APP-211ENST00000462267 MRGPRDQ8TDS7 321 aa11.65□□□□□ -0.54
APP-211ENST00000462267 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
APP-211ENST00000462267 THAP7Q9BT49 309 aaPredicted RBP11.65□□□□□ -0.54
APP-211ENST00000462267 TEX12Q9BXU0 123 aa11.65□□□□□ -0.54
APP-211ENST00000462267 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
APP-211ENST00000462267 RGS11O94810 467 aa11.64□□□□□ -0.55
APP-211ENST00000462267 RPP14O95059 124 aaKnown RBP11.64□□□□□ -0.55
APP-211ENST00000462267 BRI3O95415 125 aa11.64□□□□□ -0.55
APP-211ENST00000462267 ATF1P18846 271 aa11.64□□□□□ -0.55
APP-211ENST00000462267 SSTR5P35346 364 aa11.64□□□□□ -0.55
APP-211ENST00000462267 RAB40BQ12829 278 aa11.64□□□□□ -0.55
APP-211ENST00000462267 GK3PQ14409 553 aa11.64□□□□□ -0.55
APP-211ENST00000462267 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
APP-211ENST00000462267 MMDQ15546 238 aa11.64□□□□□ -0.55
APP-211ENST00000462267 PAN3Q58A45 887 aaKnown RBP11.64□□□□□ -0.55
APP-211ENST00000462267 UTS2BQ765I0 119 aa11.64□□□□□ -0.55
APP-211ENST00000462267 SAXO1Q8IYX7 474 aa11.64□□□□□ -0.55
APP-211ENST00000462267 OR52M1Q8NGK5 317 aa11.64□□□□□ -0.55
APP-211ENST00000462267 GIPC3Q8TF64 312 aa11.64□□□□□ -0.55
APP-211ENST00000462267 SLC25A19Q9HC21 320 aa11.64□□□□□ -0.55
APP-211ENST00000462267 ERGIC3Q9Y282 383 aa11.64□□□□□ -0.55
APP-211ENST00000462267 IGHV7-81A0A0B4J1V7 117 aa11.63□□□□□ -0.55
APP-211ENST00000462267 SHISA3A0PJX4 238 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms