RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ANGPTL4Q9BY76 406 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 BCL2L14Q9BZR8 327 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 DUSP21Q9H596 190 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SPACA1Q9HBV2 294 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 C1orf109Q9NX04 203 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 NAGKQ9UJ70 344 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 POMPQ9Y244 141 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 URGCP-MRPS24S4R325 110 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 TICRRQ7Z2Z1 1910 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 NISCHQ9Y2I1 1504 aa1.59□□□□□ -2.16
HDAC6-212ENST00000461608 GPR179Q6PRD1 2367 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 IGHV3OR15-7A0A075B7D8 119 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV3D-11A0A0A0MRZ8 115 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 TRPC5OSA6NMA1 111 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF729A6NN14 1252 aaPredicted RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 EFCAB9A8MZ26 197 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 F5H5K5 113 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 H3BQ85 93 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 C15orf65H3BRN8 121 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 CETN3O15182 167 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 DENRO43583 198 aaKnown RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 PSCAO43653 123 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 CALUO43852 315 aaPredicted RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 RAB36O95755 333 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 OCMP0CE72 109 aaPredicted RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 RCVRNP35243 200 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 MAGEA6P43360 314 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 INPP1P49441 399 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 STC1P52823 247 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 FOXA1P55317 472 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 FAM3AP98173 230 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 BAMBIQ13145 260 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 SLAMF1Q13291 335 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 IHHQ14623 411 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 BCL2A1Q16548 175 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 PDPK2PQ6A1A2 396 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF664Q8N3J9 261 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 FER1L6-AS1Q8NA97 138 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 OR7G1Q8NGA0 311 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 OR2K2Q8NGT1 345 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 OR5K1Q8NHB7 308 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 TVP23CQ96ET8 276 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 SMIM12Q96EX1 92 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 PGLYRP3Q96LB9 341 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 LINC01587Q99440 93 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 SHANK2-AS3Q9BTD1 123 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ULBP1Q9BZM6 244 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF436Q9C0F3 470 aaPredicted RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ASCL3Q9NQ33 180 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 UBQLN4Q9NRR5 601 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 SPANXB1Q9NS25 103 aaPredicted RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ASF1BQ9NVP2 202 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 DMAC2Q9NW81 257 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 NOSIPQ9Y314 301 aaKnown RBP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ICOSQ9Y6W8 199 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 R4GN34 69 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 MIA3Q5JRA6 1907 aa1.58□□□□□ -2.16
HDAC6-212ENST00000461608 ATRNO75882 1429 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 H3BSA7 217 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 ISLRO14498 428 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 TOX3O15405 576 aaPredicted RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 FGF16O43320 207 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 SYNGR2O43760 224 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PSIP1O75475 530 aaKnown RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PSKH1P11801 424 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PVALBP20472 110 aaPredicted RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 ACTR1BP42025 376 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 CRATP43155 626 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 DLX6P56179 175 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 KLF3P57682 345 aaPredicted RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 OR10A3P58181 314 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PMS2P3Q13401 168 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 CASP8Q14790 479 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PYCR3Q53H96 274 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 PDZD11Q5EBL8 140 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 LAIR2Q6ISS4 152 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 FAM45BPQ6NSW5 357 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 NIPAL1Q6NVV3 410 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 TCF24Q7RTU0 167 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 MUC15Q8N387 334 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 OR52E4Q8NGH9 312 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 DDI1Q8WTU0 396 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 APOBEC3DQ96AK3 386 aaPredicted RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 OTUB2Q96DC9 234 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 REEP6Q96HR9 211 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 FAM210AQ96ND0 272 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 LLPHQ9BRT6 129 aaKnown RBP1.57□□□□□ -2.16
HDAC6-212ENST00000461608 BBS2Q9BXC9 721 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 NDEL1Q9GZM8 345 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 OR51E2Q9H255 320 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 NRBP2Q9NSY0 501 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 MS4A12Q9NXJ0 267 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 TMEM216Q9P0N5 145 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 ADAMTSL3P82987 1691 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 SPATA31E1Q6ZUB1 1445 aa1.57□□□□□ -2.16
HDAC6-212ENST00000461608 BAZ1BQ9UIG0 1483 aaKnown RBP1.56□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV1OR2-108A0A075B7D4 117 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 OR5H14A6NHG9 310 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms