RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 EIF4G1Q04637 1599 aaKnown RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 IGHV1-45A0A0A0MS14 117 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 IGHV3-43A0A0B4J1X8 118 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 A0A0B4J2C4 111 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 ZNF233A6NK53 670 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 GPR171O14626 319 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 PHYHO14832 338 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 AQP9O43315 295 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 UGT2B11O75310 529 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 POP7O75817 140 aaKnown RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 ATP6V1G2O95670 118 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 HLA-AP01891 365 aaKnown RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 GUSBP08236 651 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 CRATP43155 626 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 DLX6P56179 175 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 RAB2AP61019 212 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 BAMBIQ13145 260 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 SLAMF1Q13291 335 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 ZNF660Q6AZW8 331 aaPredicted RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 CLEC6AQ6EIG7 209 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 LAIR2Q6ISS4 152 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 ZFP82Q8N141 532 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 OR4P4Q8NGL7 312 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 SPPL2BQ8TCT7 592 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 FAM210AQ96ND0 272 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 HBEGFQ99075 208 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 EBPLQ9BY08 206 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 ABCG5Q9H222 651 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 DUSP21Q9H596 190 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 TRIM45Q9H8W5 580 aaPredicted RBP1.74□□□□□ -2.13
VCL-203ENST00000461383 ZNF492Q9P255 531 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 NAGKQ9UJ70 344 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 SDK2Q58EX2 2172 aa1.74□□□□□ -2.13
VCL-203ENST00000461383 POLR3AO14802 1390 aaPredicted RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 IGKV2-24A0A0C4DH68 120 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 TMEM213A2RRL7 107 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 A6NED7 52 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 ZNF729A6NN14 1252 aaPredicted RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 D6RAR5 112 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 GOLGA8RI6L899 631 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 FGF16O43320 207 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 KLHL2O95198 593 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 BRI3O95415 125 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 GPR75O95800 540 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 CD5P06127 495 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 ZNF35P13682 527 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 CNTFRP26992 372 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 CD40LGP29965 261 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 MP68P56378 58 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 PAFAH1B3Q15102 231 aaKnown RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 BCL2A1Q16548 175 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 CLEC20AQ6ZU45 233 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 TCF23Q7RTU1 214 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 MARCH3Q86UD3 253 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 FER1L6-AS1Q8NA97 138 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 REEP6Q96HR9 211 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 UGT2B28Q9BY64 529 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 UPF3BQ9BZI7 483 aaKnown RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 SLC19A3Q9BZV2 496 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 OR51E2Q9H255 320 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 METTL17Q9H7H0 456 aaPredicted RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 KCNIP2Q9NS61 270 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 ASF1BQ9NVP2 202 aa1.73□□□□□ -2.13
VCL-203ENST00000461383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.73□□□□□ -2.13
VCL-203ENST00000461383 TBL2Q9Y4P3 447 aaKnown RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 BAZ1BQ9UIG0 1483 aaKnown RBP1.73□□□□□ -2.13
VCL-203ENST00000461383 COL1A2P08123 1366 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 OR5H14A6NHG9 310 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 F5H5K5 113 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 H3BQ85 93 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 J3QLI3 93 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 K7EQS6 105 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 TOX3O15405 576 aaPredicted RBP1.72□□□□□ -2.13
VCL-203ENST00000461383 EEF1E1O43324 174 aaKnown RBP1.72□□□□□ -2.13
VCL-203ENST00000461383 CDK14O94921 469 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 FSTL3O95633 263 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 IGKV1D-33P01593 117 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 IGKV1-33P01594 117 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 GYPCP04921 128 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 RNASE2P10153 161 aaKnown RBP1.72□□□□□ -2.13
VCL-203ENST00000461383 GABRA1P14867 456 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 CD34P28906 385 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 SULT1A2P50226 295 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 STC1P52823 247 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 SKP2Q13309 424 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 EXOC3L4Q17RC7 722 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 DNAL1Q4LDG9 190 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 DEFB134Q4QY38 66 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 PDZD11Q5EBL8 140 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 NIPAL1Q6NVV3 410 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 Q6ZQT7 251 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 PLEKHG7Q6ZR37 379 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 ZBTB8OSQ8IWT0 167 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 ZIC4Q8N9L1 334 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 LFNGQ8NES3 379 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 BPIFB6Q8NFQ5 453 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 OR11L1Q8NGX0 322 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 SMIM12Q96EX1 92 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 PYURFQ96I23 114 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms