RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SLC5A7Q9GZV3 580 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 SHARPINQ9H0F6 387 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 PFDN2Q9UHV9 154 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 FBXO9Q9UK97 447 aaPredicted RBP17.13■□□□□ 0.33
CCM2-203ENST00000461377 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 ESPL1Q14674 2120 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 SHANK1Q9Y566 2161 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 ASPMQ8IZT6 3477 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 MKRN2OSH3BPM6 223 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 TIMM8AO60220 97 aaPredicted RBP17.13■□□□□ 0.33
CCM2-203ENST00000461377 DEDDO75618 318 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 GLI4P10075 376 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 ZNF718Q3SXZ3 478 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 KRTCAP3Q53RY4 240 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 ZNF818PQ6ZRF7 136 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 MOB1BQ7L9L4 216 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 C11orf53Q8IXP5 236 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 GAPTQ8N292 157 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 PLPPR1Q8TBJ4 325 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 IGHV3-64DA0A0J9YX35 117 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 SH2D1BO14796 132 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 TPT1P13693 172 aaKnown RBP17.12■□□□□ 0.33
CCM2-203ENST00000461377 ZNF250P15622 560 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 SNTB1Q13884 538 aaKnown RBP17.12■□□□□ 0.33
CCM2-203ENST00000461377 FRYQ5TBA9 3013 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 ZNF497Q6ZNH5 498 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 Q6ZR03 302 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 TBC1D26Q86UD7 250 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 TLNRD1Q9H1K6 362 aa17.12■□□□□ 0.33
CCM2-203ENST00000461377 GCH1P30793 250 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 SRPXP78539 464 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 SMCO1Q147U7 214 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 ZNF324BQ6AW86 544 aaPredicted RBP17.11■□□□□ 0.33
CCM2-203ENST00000461377 FOXRED2Q8IWF2 684 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 FAM57AQ8TBR7 257 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 COL25A1Q9BXS0 654 aaPredicted RBP17.11■□□□□ 0.33
CCM2-203ENST00000461377 TMEM222Q9H0R3 208 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 FZR1Q9UM11 496 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 A0A1B0GWJ7 208 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 NPIPB11E5RHQ5 1161 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 HKR1P10072 659 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 FABP6P51161 128 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 H1FOOQ8IZA3 346 aaPredicted RBP17.11■□□□□ 0.33
CCM2-203ENST00000461377 SPERTQ8NA61 448 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 TMED3Q9Y3Q3 217 aa17.11■□□□□ 0.33
CCM2-203ENST00000461377 C1QTNF9BB2RNN3 333 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 CEACAM8P31997 349 aaPredicted RBP17.1■□□□□ 0.33
CCM2-203ENST00000461377 TIMM23BQ5SRD1 257 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 FIP1L1Q6UN15 594 aaKnown RBP17.1■□□□□ 0.33
CCM2-203ENST00000461377 FAM180AQ6UWF9 173 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 CCDC28AQ8IWP9 274 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 BAP18Q8IXM2 172 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 TMEM56Q96MV1 263 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 CCL28Q9NRJ3 127 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 LSM5Q9Y4Y9 91 aaKnown RBP17.1■□□□□ 0.33
CCM2-203ENST00000461377 TMEM56-RWDD3S4R434 201 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 CEP250Q9BV73 2442 aa17.1■□□□□ 0.33
CCM2-203ENST00000461377 A0A1B0GW55 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 SHOXO15266 292 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 HAND1O96004 215 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 MBPP02686 304 aaPredicted RBP17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L2P0CJ85 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L3P0CJ86 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L4P0CJ87 422 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L5P0CJ88 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L6P0CJ89 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4L7P0CJ90 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 FOXC1Q12948 553 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 SLC35G3Q8N808 338 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 OR10J5Q8NHC4 309 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 S100PBPQ96BU1 408 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 KIRREL1Q96J84 757 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 SFXN3Q9BWM7 321 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 BARX1Q9HBU1 254 aaPredicted RBP17.09■□□□□ 0.33
CCM2-203ENST00000461377 DUX4Q9UBX2 424 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 OR2W1Q9Y3N9 320 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 K7EPK0 472 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 SCGB1D2O95969 90 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 TMEM268Q5VZI3 342 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 MEX3BQ6ZN04 569 aaKnown RBP17.09■□□□□ 0.33
CCM2-203ENST00000461377 ZNF826PQ6ZT77 177 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 HSD17B13Q7Z5P4 300 aaPredicted RBP17.09■□□□□ 0.33
CCM2-203ENST00000461377 FAM71E2Q8N5Q1 922 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 USB1Q9BQ65 265 aaKnown RBP17.09■□□□□ 0.33
CCM2-203ENST00000461377 WIPI2Q9Y4P8 454 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 CFAP47Q6ZTR5 3102 aa17.09■□□□□ 0.33
CCM2-203ENST00000461377 INTS1Q8N201 2190 aaKnown RBP17.08■□□□□ 0.33
CCM2-203ENST00000461377 HSD17B6O14756 317 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 HOXD4P09016 255 aaPredicted RBP17.08■□□□□ 0.33
CCM2-203ENST00000461377 FGF2P09038 288 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 RPL12P30050 165 aaKnown RBP17.08■□□□□ 0.33
CCM2-203ENST00000461377 C3orf36Q3SXR2 165 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 PRAMEF6Q5VXH4 476 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 ABHD17AQ96GS6 310 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 MSL2Q9HCI7 577 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 ZFP57Q9NU63 452 aa17.08■□□□□ 0.33
CCM2-203ENST00000461377 MBNL3Q9NUK0 354 aaKnown RBP17.08■□□□□ 0.33
CCM2-203ENST00000461377 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.33
CCM2-203ENST00000461377 PRRC2CQ9Y520 2896 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms