RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 A0A0G2JK05 382 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 NPIPB13A6NJU9 1138 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 NPIPB4C9JG80 1138 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 TGFBR3LH3BV60 316 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 M0R296 226 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 CT45A10P0DMU9 189 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-205ENST00000460170 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 YIF1AO95070 293 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 RECKO95980 971 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 SP1P08047 785 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 CSN1S1P47710 185 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 VMA21Q3ZAQ7 101 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 IGHMP01871 453 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-205ENST00000460170 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 A0A1W2PQM1 296 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-205ENST00000460170 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-205ENST00000460170 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 TTTY12Q9BZ98 90 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 KCNAB3O43448 404 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 PRF1P14222 555 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 H2BFSP57053 126 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 TXN2Q99757 166 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 FGF2P09038 288 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM108Q6UXF1 575 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 SPSB2Q99619 263 aa12.86□□□□□ -0.35
PTPRU-205ENST00000460170 DVL1O14640 695 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 KIR2DS2P43631 304 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 SULT1A1P50225 295 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 BTNL3Q6UXE8 466 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 SLC25A40Q8TBP6 338 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 CYTIPO60759 359 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 NTF3P20783 257 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 FAM210BQ96KR6 192 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF251Q9BRH9 671 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 HES4Q9HCC6 221 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 OR5AC2Q9NZP5 309 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 A0A1B0GU03 582 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 MFNGO00587 321 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 IGHV3-13P01766 116 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 IGHV3-7P01780 117 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 CNN1P51911 297 aaKnown RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM50BP56557 158 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 MDP1Q86V88 176 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ARG1P05089 322 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 RD3LP0DJH9 198 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 Q5BKY6 102 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 INO80CQ6PI98 192 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-205ENST00000460170 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
PTPRU-205ENST00000460170 DUXBA0A1W2PPF3 345 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 HLA-GP17693 338 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 GZMHP20718 246 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 IGKV3D-11A0A0A0MRZ8 115 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 CEACAM21Q3KPI0 293 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 PRR27Q6MZM9 219 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 R3HDM4Q96D70 268 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-205ENST00000460170 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-205ENST00000460170 OR4S2Q8NH73 311 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 GMPPAQ96IJ6 420 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF835Q9Y2P0 537 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 CHEK1O14757 476 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM255AQ5JRV8 349 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 GAL3ST2Q9H3Q3 398 aa12.84□□□□□ -0.35
PTPRU-205ENST00000460170 OR2A4O95047 310 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 SPP1P10451 314 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 DAOP14920 347 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 GALR1P47211 349 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 MOB3BQ86TA1 216 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms