RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 DYNLT3P51808 116 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 PRRX1P54821 245 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 MED22Q15528 200 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 ARSJQ5FYB0 599 aaPredicted RBP13.07□□□□□ -0.32
CPSF6-203ENST00000456847 GLIPR1L1Q6UWM5 242 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 IDI2-AS1Q9NZ38 188 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 H3BUI4 141 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 CEACAM3P40198 252 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 HLA-DRB5Q30154 266 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 C11orf88Q6PI97 169 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 NKAIN3Q8N8D7 197 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 CREB3L1Q96BA8 519 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 KIRREL1Q96J84 757 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 TMED9Q9BVK6 235 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 NCOR1P1Q9H4R4 102 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 IFT22Q9H7X7 185 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
CPSF6-203ENST00000456847 TMEM30CPA0ZSE6 113 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 PIN1P1O15428 100 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 IL1AP01583 271 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 EFNB2P52799 333 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 SPHARQ15513 63 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 CCBE1Q6UXH8 406 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-203ENST00000456847 Q6ZTK2 550 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 SGCDQ92629 289 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 OR5M11Q96RB7 305 aa13.06□□□□□ -0.32
CPSF6-203ENST00000456847 TRAV39A0A0B4J263 110 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 VSIG10L2P0DP72 767 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 MYF6P23409 242 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 BRS3P32247 399 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 IZUMO2Q6UXV1 221 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 CDH26Q8IXH8 852 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 OR9G1Q8NH87 305 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 AMMECR1Q9Y4X0 333 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-203ENST00000456847 NBEAL1Q6ZS30 2694 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 A0A087X0M5 115 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 A0A1B0GX30 115 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 SSTR5P35346 364 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 GNG10P50151 68 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 SLC35A2P78381 396 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 PAX5Q02548 391 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 INSL4Q14641 139 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 HERPUD1Q15011 391 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 ACSM3Q53FZ2 586 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 RBM48Q5RL73 367 aaKnown RBP13.05□□□□□ -0.32
CPSF6-203ENST00000456847 TPTE2P1Q5T6R2 138 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 RFESDQ8TAC1 157 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 UFD1Q92890 307 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 LEAP2Q969E1 77 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 ANKRD60Q9BZ19 345 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 CCDC90BQ9GZT6 254 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 BANF2Q9H503 90 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 ZNF702PQ9H963 129 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 SPACA1Q9HBV2 294 aa13.05□□□□□ -0.32
CPSF6-203ENST00000456847 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 RGS10O43665 173 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 CRTAPO75718 401 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-203ENST00000456847 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 CGB3P0DN86 165 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 CGB7P0DN87 165 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 HSPA13P48723 471 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
CPSF6-203ENST00000456847 SELENOIQ9C0D9 397 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 MMP28Q9H239 520 aa13.04□□□□□ -0.32
CPSF6-203ENST00000456847 LSM2Q9Y333 95 aaKnown RBP13.04□□□□□ -0.32
CPSF6-203ENST00000456847 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 PEX14O75381 377 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 HSMCR30P0CW71 290 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 MGMTP16455 207 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 MNDAP41218 407 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 GPR50Q13585 617 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 HABP2Q14520 560 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-203ENST00000456847 UTF1Q5T230 341 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 TOMM40LQ969M1 308 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 RPEQ96AT9 228 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 UQCC2Q9BRT2 126 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 MCRIP1C9JLW8 97 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 AIPO00170 330 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 CD24P25063 80 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 FAM27D1Q5T7N8 215 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 C11orf44Q8N8P7 122 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 OR10A7Q8NGE5 316 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 AKR1E2Q96JD6 320 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 CNBD2Q96M20 576 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 MMP27Q9H306 513 aa13.03□□□□□ -0.32
CPSF6-203ENST00000456847 NPIPB11E5RHQ5 1161 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 J3QR06 171 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 IRF3Q14653 427 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 HSD17B12Q53GQ0 312 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms