RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CLCC1Q96S66 551 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 TMEM222Q9H0R3 208 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 C12orf49Q9H741 205 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 SPRR3Q9UBC9 169 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 MPC1Q9Y5U8 109 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 KNTC1P50748 2209 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 C1orf196B1AJZ1 125 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TRDCB7Z8K6 153 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TUSC2O75896 110 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 AKR1C3P42330 323 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 P2RY1P47900 373 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 NOVA1P51513 510 aaKnown RBP15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TSC22D1Q15714 1073 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 FBXW9Q5XUX1 488 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 FBXW12Q6X9E4 464 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 IL22RA1Q8N6P7 574 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 NANPQ8TBE9 248 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 GTF3AQ92664 365 aaKnown RBP15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TMEM56Q96MV1 263 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 WFDC1Q9HC57 220 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TMEM56-RWDD3S4R434 201 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 ANKRD30BLA7E2S9 258 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 ST8SIA3O43173 380 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 TK1P04183 234 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 SRPXP78539 464 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 LINC00596Q86U02 117 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 PLK3Q9H4B4 646 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 CACFD1Q9UGQ2 172 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 POMT1Q9Y6A1 747 aa15.7■□□□□ 0.1
SEMA3B-209ENST00000456560 ARID1AO14497 2285 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 IGKV1-6A0A0C4DH72 117 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 OR5B21A6NL26 309 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 OR8U9P0C7N5 309 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 CLN3Q13286 438 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 CLEC9AQ6UXN8 241 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 OR8U1Q8NH10 309 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 C11orf1Q9H5F2 150 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 GP6Q9HCN6 339 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 RPS10P5Q9NQ39 176 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 KPTNQ9Y664 436 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 ATP23Q9Y6H3 246 aa15.69■□□□□ 0.1
SEMA3B-209ENST00000456560 TRBV6-6A0A0A6YYG2 114 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 TRGV5A0A0B4J1U4 118 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 KIR2DS1A0A191URI9 304 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ARGFXA6NJG6 315 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 SLC22A20A6NK97 555 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 FAM157AC9JC47 383 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 S100A6P06703 90 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 PAX6P26367 422 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 KIR2DS4P43632 304 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 PPT1P50897 306 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 KIR2DS1Q14954 304 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ZNF766Q5HY98 468 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 MEX3BQ6ZN04 569 aaKnown RBP15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 TBC1D26Q86UD7 250 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 MDP1Q86V88 176 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ZNF573Q86YE8 665 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 SUMF2Q8NBJ7 301 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 DEFB124Q8NES8 71 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 SECTM1Q8WVN6 248 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ZNF488Q96MN9 340 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 RIMS4Q9H426 269 aaPredicted RBP15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 RCL1Q9Y2P8 373 aaKnown RBP15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 IGKV1D-13A0A0B4J2D9 117 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 CDS2O95674 445 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 CTXN2P0C2S0 81 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 IGKV1-13P0DP09 117 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 CBR1P16152 277 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 GNG3P63215 75 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 IL24Q13007 206 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ZNF818PQ6ZRF7 136 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 LYPD6BQ8NI32 183 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 MRPL30Q8TCC3 161 aaKnown RBP15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 HIST1H2BAQ96A08 127 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 EGLN1Q9GZT9 426 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 ZDHHC11Q9H8X9 412 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 SPACA1Q9HBV2 294 aa15.68■□□□□ 0.1
SEMA3B-209ENST00000456560 CELSR3Q9NYQ7 3312 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 NKX2-6A6NCS4 301 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 S100A9P06702 114 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 SOX8P57073 446 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 SLC16A13Q7RTY0 426 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 SELENOHQ8IZQ5 122 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 ZNF565Q8N9K5 539 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 NEK7Q8TDX7 302 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 NANOS1Q8WY41 292 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 GINS3Q9BRX5 216 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 PKIBQ9C010 78 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 PARP12Q9H0J9 701 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 OR51I2Q9H344 312 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 HSPB6O14558 160 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 EIF2S3LQ2VIR3 472 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 OR2T2Q6IF00 324 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 RBMS3Q6XE24 437 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 GAPTQ8N292 157 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 UBE2J1Q9Y385 318 aaPredicted RBP15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 FREM2Q5SZK8 3169 aa15.67■□□□□ 0.1
SEMA3B-209ENST00000456560 BORCS7-ASMTA0A0B4J1R7 106 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms