RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 OR4M1Q8NGD0 313 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 OR5H6Q8NGV6 325 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 DYNC2LI1Q8TCX1 351 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 PHF21AQ96BD5 680 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 GAL3ST2Q9H3Q3 398 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 RAB9BQ9NP90 201 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 OPN4Q9UHM6 478 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF729A6NN14 1252 aaPredicted RBP11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 TOX4O94842 621 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 MMP9P14780 707 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 PRTN3P24158 256 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 TMEM50BP56557 158 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 ARF6P62330 175 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 TRAT1Q6PIZ9 186 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 METAP1DQ6UB28 335 aaPredicted RBP11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 C6orf201Q7Z4U5 140 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 S100A16Q96FQ6 103 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 ZNF714Q96N38 554 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 SULT4A1Q9BR01 284 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.53
HMGXB4-204ENST00000455359 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 A0A075B6Q4 140 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 TRBV6-6A0A0A6YYG2 114 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 ORC5O43913 435 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 APOA1P02647 267 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 GSTP1P09211 210 aaKnown RBP11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 CGB3P0DN86 165 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 CGB7P0DN87 165 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 DLX6P56179 175 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 BPIFB3P59826 476 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 ZNF273Q14593 569 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 TMEM30BQ3MIR4 351 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 MOB1BQ7L9L4 216 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 TRAPPC6BQ86SZ2 158 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 TPRX1Q8N7U7 411 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 SAMD12Q8N8I0 201 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 OR10A7Q8NGE5 316 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 NANPQ8TBE9 248 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 PECRQ9BY49 303 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 C12orf4Q9NQ89 552 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
HMGXB4-204ENST00000455359 WNK2Q9Y3S1 2297 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 UBE2QL1A1L167 161 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 MFNGO00587 321 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 TPPPO94811 219 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 NAPSAO96009 420 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 ERVFRD-1P60508 538 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 SCGB2A2Q13296 93 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 PNLIPRP3Q17RR3 467 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 Q8N7P7 452 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 TBX15Q96SF7 602 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 HEXA-AS1Q9H8Q6 139 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 MBNL3Q9NUK0 354 aaKnown RBP11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 COMMD3Q9UBI1 195 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 TRAPPC2LQ9UL33 140 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 A3GALT2U3KPV4 340 aa11.75□□□□□ -0.53
HMGXB4-204ENST00000455359 XRCC3O43542 346 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 PITPNAQ00169 270 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 DYRK2Q92630 601 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 BEX2Q9BXY8 128 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 ING3Q9NXR8 418 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 KCNIP1Q9NZI2 227 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
HMGXB4-204ENST00000455359 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 CLPXO76031 633 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 AVPP01185 164 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms