RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C9orf152Q5JTZ5 239 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 MRPL41Q8IXM3 137 aaKnown RBP12.67□□□□□ -0.38
GPC1-206ENST00000455111 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 UBALD1Q8TB05 177 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 TNFAIP8L1Q8WVP5 186 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 OR6C3Q9NZP0 311 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 DHDHQ9UQ10 334 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 OCM2P0CE71 109 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
GPC1-206ENST00000455111 CEACAM3P40198 252 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 ETV1P50549 477 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 Q8N6K4 173 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 TOMM40LQ969M1 308 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 FAM118AQ9NWS6 357 aa12.66□□□□□ -0.38
GPC1-206ENST00000455111 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 PF4P02776 101 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 THBS3P49746 956 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 RPL23AP62750 156 aaKnown RBP12.65□□□□□ -0.38
GPC1-206ENST00000455111 SLC35A2P78381 396 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 RAB40BQ12829 278 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 EBI3Q14213 229 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 HNF4GQ14541 408 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 C5orf24Q7Z6I8 188 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 SATL1Q86VE3 508 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 OR4X2Q8NGF9 303 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 TSEN15Q8WW01 171 aaKnown RBP12.65□□□□□ -0.38
GPC1-206ENST00000455111 RPEQ96AT9 228 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
GPC1-206ENST00000455111 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
GPC1-206ENST00000455111 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 GEMIN2O14893 280 aaKnown RBP12.64□□□□□ -0.39
GPC1-206ENST00000455111 SLC31A2O15432 143 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 HTR3BO95264 441 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 CCDC159P0C7I6 412 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 IGFBP3P17936 291 aaPredicted RBP12.64□□□□□ -0.39
GPC1-206ENST00000455111 RAB3AP20336 220 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 RPS11P62280 158 aaKnown RBP eCLIP12.64□□□□□ -0.39
GPC1-206ENST00000455111 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 OR2W3Q7Z3T1 314 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 ST6GALNAC6Q969X2 333 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 CREB3L1Q96BA8 519 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
GPC1-206ENST00000455111 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 P2RX4Q99571 388 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
GPC1-206ENST00000455111 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 ORC6Q9Y5N6 252 aa12.64□□□□□ -0.39
GPC1-206ENST00000455111 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 CLIC3O95833 236 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 IGHG2P01859 326 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 TMEM11P17152 192 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 MNDAP41218 407 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 REG1BP48304 166 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 GBX2P52951 348 aaPredicted RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 RBM11P57052 281 aaKnown RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 ZNF816Q0VGE8 651 aaPredicted RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 NHLRC3Q5JS37 347 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 LCNL1Q6ZST4 164 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 TMEM104Q8NE00 496 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 EAF1Q96JC9 268 aaPredicted RBP12.63□□□□□ -0.39
GPC1-206ENST00000455111 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 IL36GQ9NZH8 169 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 CLEC2DQ9UHP7 191 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 ST3GAL6Q9Y274 331 aa12.63□□□□□ -0.39
GPC1-206ENST00000455111 TRAV8-7A0A075B6U6 113 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 IGHV3-43A0A0B4J1X8 118 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 TRBV5-5A0A0J9YX44 114 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 M0QZK8 103 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 HSD17B6O14756 317 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 OGG1O15527 345 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 FGF16O43320 207 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 IGHV3-43DP0DP04 118 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 C21orf33P30042 268 aaPredicted RBP12.62□□□□□ -0.39
GPC1-206ENST00000455111 VHLP40337 213 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 MADCAM1Q13477 382 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 ZFP1Q6P2D0 407 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 Q8N9W7 124 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 ZNF439Q8NDP4 499 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 TMEM106AQ96A25 262 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms