RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C21orf140B9A014 251 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 ABCD4O14678 606 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 TDGF1P13385 188 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 CTSSP25774 331 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-213ENST00000454468 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-213ENST00000454468 RIPPLY2Q5TAB7 128 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 TP53RKQ96S44 253 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 GLS2Q9UI32 602 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 AMDHD2Q9Y303 409 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 IGHV3-43A0A0B4J1X8 118 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-213ENST00000454468 IGHV3-43DP0DP04 118 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF708P17019 499 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 OR8G1Q15617 311 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 KRBOX4Q5JUW0 171 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 ABLIM2Q6H8Q1 611 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 AKR1E2Q96JD6 320 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 DDA1Q9BW61 102 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 CYC1P08574 325 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 IL2RGP31785 369 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 GNG3P63215 75 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF124Q15973 351 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 ADGRG7Q96K78 797 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 REG4Q9BYZ8 158 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 SH2D2AQ9NP31 389 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 ZGRF1Q86YA3 2104 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 CDRT15L2A8MXV6 281 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 CXorf66Q5JRM2 361 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-213ENST00000454468 SUMF2Q8NBJ7 301 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
SMPD4-213ENST00000454468 ACTL6AO96019 429 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 DAOP14920 347 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 NFYBP25208 207 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 CFPP27918 469 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 FBXW9Q5XUX1 488 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF573Q86YE8 665 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 SVBPQ8N300 66 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 DEFB108BQ8NET1 73 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 NINJ1Q92982 152 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 TM2D1Q9BX74 207 aa10.27□□□□□ -0.76
SMPD4-213ENST00000454468 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.76
SMPD4-213ENST00000454468 GPR37O15354 613 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 MPPED1O15442 326 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 MMP7P09237 267 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF345Q14585 488 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 RNPS1Q15287 305 aaKnown RBP10.27□□□□□ -0.77
SMPD4-213ENST00000454468 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 HSD17B13Q7Z5P4 300 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-213ENST00000454468 POC1AQ8NBT0 407 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 SLC25A40Q8TBP6 338 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 TUBAL3A6NHL2 446 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 ST8SIA5O15466 376 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 HKR1P10072 659 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 GCH1P30793 250 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 LPAR6P43657 344 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 USF2Q15853 346 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-213ENST00000454468 MIDNQ504T8 468 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 SSX9Q7RTT3 188 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 OR10V1Q8NGI7 309 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 OR2G3Q8NGZ4 309 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 C10orf35Q96D05 121 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 TLNRD1Q9H1K6 362 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 USF3Q68DE3 2245 aa10.27□□□□□ -0.77
SMPD4-213ENST00000454468 CRYM-AS1A6NIL9 109 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 OR6C65A6NJZ3 312 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 E5RGE8 158 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 TERTO14746 1132 aaKnown RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 FGF2P09038 288 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 FTH1P19P0C7X4 201 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 KCNJ3P48549 501 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 PPP1CBP62140 327 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 DEFA6Q01524 100 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 OR8G2PQ6IF36 304 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 GLYATL2Q8WU03 294 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 HPSE2Q8WWQ2 592 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 WBP1Q96G27 269 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 MYOZ1Q9NP98 299 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 DNAJB11Q9UBS4 358 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 MIOXQ9UGB7 285 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 NSG2Q9Y328 171 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 TMEM267Q0VDI3 215 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 EIF3IQ13347 325 aaKnown RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 HAGHQ16775 308 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 CEACAM21Q3KPI0 293 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 PRAMEF6Q5VXH4 476 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF818PQ6ZRF7 136 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 MED12LQ86YW9 2145 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 FAM212BQ9NTI7 297 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 OR1A1Q9P1Q5 309 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 IGF2RP11717 2491 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 TLN1Q9Y490 2541 aaKnown RBP10.26□□□□□ -0.77
SMPD4-213ENST00000454468 ATRXP46100 2492 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 IGKV1D-13A0A0B4J2D9 117 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms