RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 MAPK14Q16539 360 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 CEACAM16Q2WEN9 425 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TTC32Q5I0X7 151 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC25A30Q5SVS4 291 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 STEAP4Q687X5 459 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 FBXL22Q6P050 247 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM92BQ6ZTR7 304 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 MOB1BQ7L9L4 216 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 LYG2Q86SG7 212 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 LGI3Q8N145 548 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM252Q8N6L7 170 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 CCNYL1Q8N7R7 359 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 GPR32P1Q8NGA4 272 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR10G9Q8NGN4 311 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR6N1Q8NGY5 312 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR9G1Q8NH87 305 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2V1Q8NHB1 315 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 NEK7Q8TDX7 302 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 DGCR14Q96DF8 476 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 IMP4Q96G21 291 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 PGLYRP3Q96LB9 341 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 BIRC8Q96P09 236 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMED9Q9BVK6 235 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC19A3Q9BZV2 496 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 DEFB127Q9H1M4 99 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 MAP1LC3AQ9H492 121 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 DDIT4Q9NX09 232 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 FARSAQ9Y285 508 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 UBIAD1Q9Y5Z9 338 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 VPS13AQ96RL7 3174 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 DNAH14Q0VDD8 3507 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 MAP1BP46821 2468 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM131Q92545 1883 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 DOCK3Q8IZD9 2030 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CHD6Q8TD26 2715 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ANKRD11Q6UB99 2663 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 A0A0U1RQV1 116 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 LOC105371267A0A1B0GV96 52 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 GNG14A0A1W2PPG7 69 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 J3QT63 122 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 PHOX2AO14813 284 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF780AO75290 641 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 IFNA14P01570 189 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CTSLP07711 333 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD99P14209 185 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CXCR1P25024 350 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 RPS12P25398 132 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 TSPOP30536 169 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 P2RX1P51575 399 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 RPS23P62266 143 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ARG2P78540 354 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF266Q14584 549 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 GINS1Q14691 196 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF630Q2M218 657 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 TFDP3Q5H9I0 405 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CASC10Q5T4H9 136 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 HIST2H3PS2Q5TEC6 136 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM42Q69YG0 159 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SPNS3Q6ZMD2 512 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM231DQ6ZW35 169 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 LRRC25Q8N386 305 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 C11orf72Q8NBR9 251 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR11H7Q8NGC8 314 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR51D1Q8NGF3 324 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR4S2Q8NH73 311 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 BLNKQ8WV28 456 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ASB13Q8WXK3 278 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR10C1Q96KK4 312 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 MAGEB18Q96M61 343 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZIM3Q96PE6 472 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SMIM14Q96QK8 99 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ARHGDIGQ99819 225 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 POLR2J2Q9GZM3 115 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLIRPQ9GZT3 109 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 POLR2J3Q9H1A7 115 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 MS4A6AQ9H2W1 248 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 TRABDQ9H4I3 376 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC25A22Q9H936 323 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SH2D2AQ9NP31 389 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 MYOZ1Q9NP98 299 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 RRAGDQ9NQL2 400 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM49BQ9NUQ9 324 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 AIG1Q9NVV5 245 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 GLTPQ9NZD2 209 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 CHD7Q9P2D1 2997 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF391Q9UJN7 358 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 NDRG2Q9UN36 371 aaKnown RBP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 TIMM22Q9Y584 194 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 PTPRFP10586 1907 aa2.73□□□□□ -1.97
HMGB1P15-201ENST00000453854 C2orf16Q68DN1 1984 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 H7C417 338 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 I3L4J1 428 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 UPK2O00526 184 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 TRANK1O15050 2925 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 KMOO15229 486 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 TRIOO75962 3097 aa2.72□□□□□ -1.97
HMGB1P15-201ENST00000453854 SNRPAP09012 282 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms