RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 NPIPB11E5RHQ5 1161 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-207ENST00000453796 GTF2F2P13984 249 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 MAPK3P27361 379 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-207ENST00000453796 HTR1DP28221 377 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 GLP1RP43220 463 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 EFNB2P52799 333 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 SLC22A6Q4U2R8 563 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 JAGN1Q8N5M9 183 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 MS4A15Q8N5U1 240 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF565Q8N9K5 539 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 NDNFQ8TB73 568 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF596Q8TC21 504 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 S100A13Q99584 98 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 PCDHB16Q9NRJ7 776 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 CALYQ9NYX4 217 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 RCC2Q9P258 522 aaKnown RBP11.72□□□□□ -0.53
HSPG2-207ENST00000453796 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 SIGLEC9Q9Y336 463 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-207ENST00000453796 LY6LH3BQJ8 138 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 IL1AP01583 271 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 CRHBPP24387 322 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 GABRA5P31644 462 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 GPR50Q13585 617 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 GPR176Q14439 515 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 ACSM3Q53FZ2 586 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 FAM27D1Q5T7N8 215 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 GLIPR1L1Q6UWM5 242 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 IZUMO2Q6UXV1 221 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 Q8N2B8 174 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 NKAIN3Q8N8D7 197 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
HSPG2-207ENST00000453796 VCX3BQ9H321 246 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF702PQ9H963 129 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 ABCB10Q9NRK6 738 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 IDI2-AS1Q9NZ38 188 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 PITPNC1Q9UKF7 332 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
HSPG2-207ENST00000453796 BUB1B-PAK6H3BSN5 160 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 CD37P11049 281 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 MED22Q15528 200 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 AWAT2Q6E213 333 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 LRRTM1Q86UE6 522 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 TMEM219Q86XT9 240 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 OR10A7Q8NGE5 316 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 OR4C13Q8NGP0 309 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 UQCC2Q9BRT2 126 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 TMED9Q9BVK6 235 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 NPFFR1Q9GZQ6 430 aa11.7□□□□□ -0.54
HSPG2-207ENST00000453796 TRAV39A0A0B4J263 110 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 F2RL2O00254 374 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TIMM23O14925 209 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 RGS10O43665 173 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 NFYBP25208 207 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 SSTR5P35346 364 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 HSPA13P48723 471 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TPBGQ13641 420 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 ATAD3CQ5T2N8 411 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 C11orf88Q6PI97 169 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 PRSS48Q7RTY5 328 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TMEM104Q8NE00 496 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 PHYHIPQ92561 330 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 Q96M66 194 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 MMP28Q9H239 520 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 BANF2Q9H503 90 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TCF7L1Q9HCS4 588 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 ISYNA1Q9NPH2 558 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 VWFP04275 2813 aa11.69□□□□□ -0.54
HSPG2-207ENST00000453796 TMEM30CPA0ZSE6 113 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A10PA6NDY2 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A18PA6NE21 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A16PA6NEW6 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A20PA6NIJ5 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A7PA6NKC0 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A12PA8MX19 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A5PA8MXJ8 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A23PA8MXZ1 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 J3QR06 171 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 UCHL1P09936 223 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A15PP0C7V4 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A13PP0C7W8 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A14PP0C7W9 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 FAM90A24PP0C7X0 464 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 MGMTP16455 207 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 PRRX1P54821 245 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 LIPKQ5VXJ0 399 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 SIGIRRQ6IA17 410 aa11.68□□□□□ -0.54
HSPG2-207ENST00000453796 TMEM91Q6ZNR0 172 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms