RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TMEM230Q96A57 120 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 ADAT3Q96EY9 351 aaPredicted RBP13.55□□□□□ -0.24
SNX17-204ENST00000453453 KIRREL1Q96J84 757 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 SOX7Q9BT81 388 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 REPIN1Q9BWE0 567 aaKnown RBP13.55□□□□□ -0.24
SNX17-204ENST00000453453 TAF9BQ9HBM6 251 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 CACFD1Q9UGQ2 172 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 HEATR1Q9H583 2144 aaKnown RBP13.54□□□□□ -0.24
SNX17-204ENST00000453453 CA11O75493 328 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 MED6O75586 246 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 FAHP16930 419 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 MAS1LP35410 378 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 GLP1RP43220 463 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 LPAR6P43657 344 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 TAS2R46P59540 309 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 OR52W1Q6IF63 320 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 CSNK2A3Q8NEV1 391 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 SULT4A1Q9BR01 284 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 HRH4Q9H3N8 390 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 ZMAT3Q9HA38 289 aaKnown RBP13.54□□□□□ -0.24
SNX17-204ENST00000453453 HIVEP3Q5T1R4 2406 aa13.54□□□□□ -0.24
SNX17-204ENST00000453453 MSGN1A6NI15 193 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 LINC00587B1AMM8 73 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 KALRNO60229 2985 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 ZG16O60844 167 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 C1QL1O75973 258 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 HIST1H1DP16402 221 aaKnown RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 SELEP16581 610 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 NFYBP25208 207 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 RPS23P62266 143 aaKnown RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 SNRPEP62304 92 aaKnown RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 ARL6IP1Q15041 203 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 CLEC18BQ6UXF7 455 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 OR13C9Q8NGT0 318 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 TCTEX1D2Q8WW35 142 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 EMG1Q92979 244 aaKnown RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 C14orf79Q96F83 325 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 WFIKKN1Q96NZ8 548 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 CHST5Q9GZS9 411 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 ARV1Q9H2C2 271 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 TMEM231Q9H6L2 316 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 OR5AC2Q9NZP5 309 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 ZNF816-ZNF321PA0A0X1KG74 233 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 WRBO00258 174 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 IGHV2-5P01817 119 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 THBDP07204 575 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 CD40P25942 277 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 RHEBQ15382 184 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 FAM209BQ5JX69 171 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 SPATA46Q5T0L3 261 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 OR5H2Q8NGV7 314 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 SLC25A40Q8TBP6 338 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
SNX17-204ENST00000453453 LPAR5Q9H1C0 372 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 SMDT1Q9H4I9 107 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 PLEKHA2Q9HB19 425 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 FAM96BQ9Y3D0 163 aa13.53□□□□□ -0.24
SNX17-204ENST00000453453 A0A1B0GW64 132 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 PMP2P02689 132 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 RAC2P15153 192 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 ACKR3P25106 362 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 GCH1P30793 250 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 CNN3Q15417 329 aaKnown RBP13.52□□□□□ -0.25
SNX17-204ENST00000453453 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 C22orf34Q6ZV56 151 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 OR56B1Q8NGI3 324 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 TECTBQ96PL2 329 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 GAL3ST1Q99999 423 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 OR2J1Q9GZK6 312 aa13.52□□□□□ -0.25
SNX17-204ENST00000453453 KMT2BQ9UMN6 2715 aaPredicted RBP13.52□□□□□ -0.25
SNX17-204ENST00000453453 ANKRD30BLA7E2S9 258 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 CD300LBA8K4G0 201 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 HCKP08631 526 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 HKR1P10072 659 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 ZNF44P15621 663 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 GNB3P16520 340 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 RAB5CP51148 216 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 PRSS12P56730 875 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 SUPT4H1P63272 117 aaKnown RBP13.51□□□□□ -0.25
SNX17-204ENST00000453453 CDSNQ15517 529 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 ZFP82Q8N141 532 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 CMBLQ96DG6 245 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 CPNE2Q96FN4 548 aaPredicted RBP13.51□□□□□ -0.25
SNX17-204ENST00000453453 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
SNX17-204ENST00000453453 C1orf123Q9NWV4 160 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 GHRLQ9UBU3 117 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms