RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 J3QLI3 93 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 HPGDSO60760 199 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 MT-ND4P03905 459 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 CSN2P05814 226 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 EIF4EP06730 217 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 CGB3P0DN86 165 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 CGB7P0DN87 165 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 EPHA1P21709 976 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 P2RX3P56373 397 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 SCAND1P57086 179 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 HILS1P60008 231 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 PAX8Q06710 450 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 GAPTQ8N292 157 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 Q8N7P7 452 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 OR5D13Q8NGL4 314 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 SGMS2Q8NHU3 365 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 NUDT16L1Q9BRJ7 211 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 DCUN1D5Q9BTE7 237 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 URM1Q9BTM9 101 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 SUCNR1Q9BXA5 334 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 TMPRSS13Q9BYE2 586 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 ATG5Q9H1Y0 275 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
VCX3B-204ENST00000453306 KIF25Q9UIL4 384 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 ETV7Q9Y603 341 aa12.86□□□□□ -0.35
VCX3B-204ENST00000453306 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 GPR37O15354 613 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 TMEM127O75204 238 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 CCL3L1P16619 93 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 ELK1P19419 428 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 GATA3P23771 443 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
VCX3B-204ENST00000453306 EDDM3BP56851 147 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 PAX5Q02548 391 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 UTF1Q5T230 341 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 IZUMO1Q8IYV9 350 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
VCX3B-204ENST00000453306 NDUFA13Q9P0J0 144 aa12.85□□□□□ -0.35
VCX3B-204ENST00000453306 ODAMA1E959 279 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 TMEM89A2RUT3 159 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 MFNGO00587 321 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 MMP23AO75900 390 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 ECDO95905 644 aaPredicted RBP12.84□□□□□ -0.35
VCX3B-204ENST00000453306 GLAP06280 429 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 PPIAL4GP0DN37 164 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 PTHLHP12272 177 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 MMP9P14780 707 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 GNB3P16520 340 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 GDNFP39905 211 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 ARF6P62330 175 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
VCX3B-204ENST00000453306 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
VCX3B-204ENST00000453306 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 DCAF12L2Q5VW00 463 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 SLC35E4Q6ICL7 350 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 Q6ZTK2 550 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 OR13A1Q8NGR1 328 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 NANPQ8TBE9 248 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 NEDD4LQ96PU5 975 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
VCX3B-204ENST00000453306 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 NOL3O60936 208 aaKnown RBP12.83□□□□□ -0.36
VCX3B-204ENST00000453306 HIST1H1DP16402 221 aaKnown RBP12.83□□□□□ -0.36
VCX3B-204ENST00000453306 CDK2P24941 298 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 C17orf58Q2M2W7 97 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 CDNFQ49AH0 187 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 CD276Q5ZPR3 534 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 FAM53AQ6NSI3 398 aaPredicted RBP12.83□□□□□ -0.36
VCX3B-204ENST00000453306 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 MRPL30Q8TCC3 161 aaKnown RBP12.83□□□□□ -0.36
VCX3B-204ENST00000453306 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 ACOT12Q8WYK0 555 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 CORO2AQ92828 525 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 RAB3CQ96E17 227 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 TBX15Q96SF7 602 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 SPACA1Q9HBV2 294 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
VCX3B-204ENST00000453306 A0A075B6Q4 140 aa12.82□□□□□ -0.36
VCX3B-204ENST00000453306 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
VCX3B-204ENST00000453306 NAPSAO96009 420 aa12.82□□□□□ -0.36
VCX3B-204ENST00000453306 RCC1P18754 421 aaPredicted RBP12.82□□□□□ -0.36
VCX3B-204ENST00000453306 FPR2P25090 351 aa12.82□□□□□ -0.36
VCX3B-204ENST00000453306 KCNJ3P48549 501 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms