RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 IL18Q14116 193 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 ZNF79Q15937 498 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 NHLRC3Q5JS37 347 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 TMEM69Q5SWH9 247 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 TMEM86BQ8N661 226 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 LY6G5BQ8NDX9 201 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 C15orf40Q8WUR7 153 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 SSMEM1Q8WWF3 244 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 BORCS5Q969J3 196 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 Q96M66 194 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 DCTN5Q9BTE1 182 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 SRRQ9GZT4 340 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 LPAR5Q9H1C0 372 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 ATG5Q9H1Y0 275 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 NLKQ9UBE8 527 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM96BQ9Y3D0 163 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 POMT1Q9Y6A1 747 aa14.8□□□□□ -0.04
SQSTM1-204ENST00000453046 XRCC3O43542 346 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 NOS1APO75052 506 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 RHBDL1O75783 438 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 CHRM2P08172 466 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 SELLP14151 372 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 NDUFB7P17568 137 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 AMY2BP19961 511 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 BCL3P20749 454 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 GABRA2P47869 451 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 PPP5CP53041 499 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 ZNF788Q6ZQV5 615 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 OSR2Q8N2R0 312 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 GDPD1Q8N9F7 314 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 POC1AQ8NBT0 407 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 OR56B1Q8NGI3 324 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 DMRTB1Q96MA1 342 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 CCDC32Q9BV29 185 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 CHIAQ9BZP6 476 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 BANF2Q9H503 90 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 SIRT7Q9NRC8 400 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 MTCH1Q9NZJ7 389 aa14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 SLC25A10Q9UBX3 287 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-204ENST00000453046 A0A0U1RQK1 487 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 A0A1W2PQ09 198 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A10PA6NDY2 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A18PA6NE21 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A16PA6NEW6 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A20PA6NIJ5 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A8PA6NJQ4 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A7PA6NKC0 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 OR2AT4A6NND4 320 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A22PA8MWA6 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A12PA8MX19 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A5PA8MXJ8 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A23PA8MXZ1 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 RAB27BO00194 218 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 TFF1P04155 84 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A15PP0C7V4 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A13PP0C7W8 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A14PP0C7W9 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM90A24PP0C7X0 464 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 RBM11P57052 281 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 TAS2R20P59543 309 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 MRPS10P82664 201 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 PITPNAQ00169 270 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 LINC00596Q86U02 117 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 FAM89BQ8N5H3 189 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 OR51T1Q8NGJ9 327 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 OR4F5Q8NH21 305 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 ANGPTL6Q8NI99 470 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 GAFA1Q96PS6 74 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 NRIP2Q9BQI9 281 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 SELENOIQ9C0D9 397 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 BEX1Q9HBH7 125 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 PALMDQ9NP74 551 aa14.78□□□□□ -0.04
SQSTM1-204ENST00000453046 A0A0A6YYD4 124 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 A0A1B0GUS0 222 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 CTDSPLO15194 276 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 SIGLEC5O15389 551 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 KNG1P01042 644 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 NPBWR2P48146 333 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 RAG2P55895 527 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 ERVK11-1P61568 191 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 GUCA2AQ02747 115 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 IL13RA2Q14627 380 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 KIR3DL3Q8N743 410 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 EMG1Q92979 244 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 HES4Q9HCC6 221 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 RBFOX1Q9NWB1 397 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 MGAM2Q2M2H8 2515 aa14.77□□□□□ -0.05
SQSTM1-204ENST00000453046 FOXI3A8MTJ6 420 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 VEGFCP49767 419 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 DCTN2Q13561 401 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 ARL6IP1Q15041 203 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 MPV17LQ2QL34 196 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 PYDC2Q56P42 97 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 PRR31Q5SQ13 230 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 C17orf107Q6ZR85 190 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 IZUMO1Q8IYV9 350 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 FAM58AQ8N1B3 248 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 TMEM185AQ8NFB2 350 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 OR10R2Q8NGX6 335 aa14.76□□□□□ -0.05
SQSTM1-204ENST00000453046 C8orf46Q8TAG6 207 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms